Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq505 109 1e-21 seq38 91.5 3e-16 >seq505 Length=1536 Score = 109 bits (120), Expect = 1e-21 Identities = 186/268 (69%), Gaps = 30/268 (11%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAG---------GCCTTT------GCTCGAA 119 ||||||||| |||||||||||||||||||| || ||| | | ||| Sbjct 918 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAAACAGTTAAAGCATTTTACTGCGTTTGAA 859 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTG--------CGGTTCTATTTTGTTGGTTT 171 ||| |||||||||||| | ||| | || | | |||| |||| || ||| Sbjct 858 TACTACAGCATGGAATAACAAAATTGAACAAGTCAAAACTCTGTTCCTTTTTCTTATTTT 799 Query 172 CTAGGACCGCCGTAATGATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGA 230 || | || | |||||||||| ||| | ||||| | ||||||| ||||||| Sbjct 798 ---GG--CTTAGTTACGATTAATAGGAGTAGCTTGGGGGCATTTGTATTCAGATGTCAGA 744 Query 231 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTT 290 |||||||||||| ||||| || |||| ||| ||||||||||| || || | || || Sbjct 743 GGTGAAATTCTTAGATTTTCTGGAGACAAACAACTGCGAAAGCATTTGCCTAAAATACTT 684 Query 291 TCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||||||||| ||| Sbjct 683 CCATTAATCA-AGAACGAAAGTTAAGGG 657 >seq38 Length=135006 Score = 91.5 bits (100), Expect = 3e-16 Identities = 183/269 (68%), Gaps = 27/269 (10%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC---------------CTTTGCTCG 117 |||||| |||| ||||||||||||| |||||| | || || | Sbjct 11080 TTTTACCTTGAGTAAATTAGAGTGTTTAAAGCAAACAGATACAACAGTTTACTGTGTTTA 11021 Query 118 AATACATTAGCATGGAATAATA-----GAAT-AG--GACGTGCGGTTCTATTTTGTTGGT 169 ||||| |||||||||||||| |||| || ||||| | ||| || | ||| | Sbjct 11020 AATACTACAGCATGGAATAATAATATCGAATGAGCCGACGTACTTTTCGTTTCT-TTGTT 10962 Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229 | | || | || | |||||| ||| ||||| ||||| | ||||||| ||| || Sbjct 10961 ATTTTGG--CTTAGTTACGATTAACAGGAATAGTTGGGGGCATTTGTATTCAGATGTTAG 10904 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||| |||| || |||| ||| | |||||| || | | | || || Sbjct 10903 AGGTGAAATTCTAAGATTATCTGGAGACGAACAATTGCGAACGCATCTGTCTAACATATT 10844 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| |||||||||||| ||| Sbjct 10843 TTCATTAATCA-AGAACGAAAGTTAAGGG 10816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915168114432