Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq205 143 6e-32 seq206 95.1 3e-17 >seq205 Length=5409 Score = 143 bits (158), Expect = 6e-32 Identities = 222/314 (71%), Gaps = 20/314 (6%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 984 AAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTG 1043 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA------CTGCTTCGATT 172 ||||||||||| ||| ||||||||||||| ||||| | || ||| ||| Sbjct 1044 GACCGTTATAGATACAGCCGCCGTTTACTATAGCTTATATACATATTATAATCTTATATT 1103 Query 173 GCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTC 232 | || | || || || | ||||| |||||| |||| |||||||| | Sbjct 1104 -ATATATAATAT---TTTTACATAATAGCACTGGGCAGATGTCAATCTTTATACATCATT 1159 Query 233 TTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGG 292 || | | |||||| | | |||||||||| |||||||||||| | ||| | | Sbjct 1160 TTTCAATTTAGCAAAGATTTGTGTTTTTGTTAAACAGTCGCT----CAAATTTTTT---- 1211 Query 293 CCTGTCA--TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 | ||| || | | | | | || |||||||||||| | | | |||||||||||||| Sbjct 1212 ATTTTCAACTAAATAAGTATCTTTTATCCCTAAGTTACAAGATAAATTTGCCGAGTTCCT 1271 Query 351 TAACAATAGTTCTC 364 ||| || | || || Sbjct 1272 TAAAAAAAATTATC 1285 >seq206 Length=6224 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || |||| |||||||||||||||||| |||||||||| Sbjct 3873 AAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAG 3932 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||| | ||| ||||||||||| Sbjct 3933 GACCGTTTACGATACAGCCGCCGTTTA 3959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062362985984