Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq361 116 6e-24 >seq361 Length=1293923 Score = 116 bits (128), Expect = 6e-24 Identities = 191/281 (68%), Gaps = 52/281 (19%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | || |||| || |||||||||| ||| | Sbjct 1235387 GTACAAAGGGCAGGGACGTAGTCAGCACAATCTA-ATGAATCATGCTTACTAGGCATT-C 1235330 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT-GAAATT-TCAAAGAT 118 |||||| |||| || ||||||||| |||||||||||||||||| | ||| |||||| Sbjct 1235329 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATATATATTGATAAAGAT 1235270 Query 119 TACCCGGACCTGTCGGCCAAGG-------TG----ATA---------------------- 145 |||| ||| ||||| ||| || ||| Sbjct 1235269 TACCTACGCCTTTCGGCGGAGGAAAAGTATGCAAAATATAAGCATCAAAGATACAAATAA 1235210 Query 146 ---------------GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 ||||||| ||| ||||||||||| ||||||| ||| || ||| Sbjct 1235209 ATGCATATTTTTAATAACTCGTTATATATATCAGTGTAGCACGCGTGCAGCCTAGTTCAT 1235150 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 |||||| ||||||||||||||| |||||| |||||||| || Sbjct 1235149 CTAAGGACATCACAGACCTGTTGTTGCCTTAAACTTCCTTG 1235109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751997289980