Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq371 118 3e-24 seq372 93.3 1e-16 >seq371 Length=29226 Score = 118 bits (130), Expect = 3e-24 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 25098 TCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGAC 25157 Query 128 CGTTATTGTTACGGCCGCCGTTTAC 152 |||||| | ||| |||||||||||| Sbjct 25158 CGTTATAGATACAGCCGCCGTTTAC 25182 >seq372 Length=5966 Score = 93.3 bits (102), Expect = 1e-16 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 5682 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 5741 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| ||| ||||||||||| Sbjct 5742 CGTTTAAAATACAGCCGCCGTTTA 5765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260795309824