Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq371 143 6e-32 seq372 95.1 3e-17 >seq371 Length=29226 Score = 143 bits (158), Expect = 6e-32 Identities = 164/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 25095 AAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTG 25154 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178 ||||||||||| ||| ||||||||||||| ||||| | | | | ||| || Sbjct 25155 GACCGTTATAGATACAGCCGCCGTTTACTATAGCTTATATATA-TATTATAATTTAATTA 25213 Query 179 -ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCG 237 | | || ||||| | ||||| |||||| |||| |||||||| | || | Sbjct 25214 CATATATTATTTTAACATAATAGCACTGGGCAGATGTCAATCTTTATACATCATTTTTCA 25273 Query 238 ACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTT 275 | |||||| | | |||||||||| ||||||||||||| Sbjct 25274 ATTTAGCAAAGATTTGTGTTTTTGTTAAACAGTCGCTT 25311 >seq372 Length=5966 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || |||| |||||||||||||||||| |||||||||| Sbjct 5679 AAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAG 5738 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||| | ||| ||||||||||| Sbjct 5739 GACCGTTTAAAATACAGCCGCCGTTTA 5765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062396047872