Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10 122 1e-25 >seq10 Length=1076571 Score = 122 bits (134), Expect = 1e-25 Identities = 192/281 (68%), Gaps = 52/281 (19%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | || ||||| || |||||||||| ||| | Sbjct 1051261 GTACAAAGGGCAGGGACGTAGTCAGCACAATCT-GATGAATCATGCTTACTAGGCATT-C 1051204 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT-GAAATT-TCAAAGAT 118 |||||| |||| || ||||||||| |||||||||||||||||| | ||| |||||| Sbjct 1051203 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATATATATTGATAAAGAT 1051144 Query 119 TACCCGGACCTGTCGGCCAAGG-------TG----ATA---------------------- 145 |||| ||| ||||| ||| || ||| Sbjct 1051143 TACCTACGCCTTTCGGCGGAGGAAAAGTATGCAAAATATAAGCATCAAAGATACAAATAA 1051084 Query 146 ---------------GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 ||||||| ||| ||||||||||| ||||||| ||| || ||| Sbjct 1051083 ATGCATATTTTTAATAACTCGTTATATATATCAGTGTAGCACGCGTGCAGCCTAGTTCAT 1051024 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 |||||| ||||||||||||||| |||||| |||||||| || Sbjct 1051023 CTAAGGACATCACAGACCTGTTGTTGCCTTAAACTTCCTTG 1050983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751994339555