Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10 111 3e-22 >seq10 Length=1076571 Score = 111 bits (122), Expect = 3e-22 Identities = 184/265 (69%), Gaps = 22/265 (8%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC---------------CTTTGCTCGAA 119 ||||||||| |||||||||||||||||||| | || || | ||| Sbjct 1050125 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAAACAGTTAAAGCATTTTACTGTGTTTGAA 1050184 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 ||| ||||||||||||| | ||| | || || | | ||||||| ||| | | Sbjct 1050185 TACTATAGCATGGAATAACAAAATTGAACAGGCTGAAATTTTTTGTTCTTTTTTCTTATT 1050244 Query 180 ---GCC--GTAATGATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGT 233 || || | |||||||||| ||| | |||| | ||||||| |||||||||| Sbjct 1050245 TTGGCTTAGTTACGATTAATAGGAGTAGCTTGGGGACATTCGTATTCAGATGTCAGAGGT 1050304 Query 234 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293 ||||||||| ||||| || |||| ||| ||||||||||| || | | || || || Sbjct 1050305 GAAATTCTTAGATTTTCTGGAGACGAACAACTGCGAAAGCATTTGTCTAAAATACTTCCA 1050364 Query 294 TTAATCAGTGAACGAAAGTTAGGGG 318 ||||||| |||||||||||| ||| Sbjct 1050365 TTAATCA-AGAACGAAAGTTAAGGG 1050388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915192888896