Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10 152 8e-35 >seq10 Length=1076571 Score = 152 bits (168), Expect = 8e-35 Identities = 106/119 (89%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA-CTCCAC 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct 1050784 GCTAATTAGCAGGTTAAGATCTCGTTCGTTATCGGAATTAACCAGACAAATCATATTCAC 1050725 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| |||||||||||| ||||| ||| ||||||||||||||||| |||||||| Sbjct 1050724 GAACTAAAAACGGCCATGCATCACCATCCAAGAAATCAAGAAAGAGCTATTAATCTGTC 1050666 Score = 96.9 bits (106), Expect = 6e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| ||| || ||||||||| ||||||||||||||| |||||| Sbjct 1051053 TCAGTGTAGCACGCGTGCAGCCTAGTTCATCTAAGGACATCACAGACCTGTTGTTGCCTT 1050994 Query 76 AAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGC 116 |||||||| | | | || | |||| || |||||||||||| Sbjct 1050993 AAACTTCCTTGTGTTAGACACACAAT-GTTCCTCTAAGAAGC 1050953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796794002337