Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10 118 2e-24 >seq10 Length=1076571 Score = 118 bits (130), Expect = 2e-24 Identities = 206/308 (67%), Gaps = 50/308 (16%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || | | || | | | |||||||| |||||| ||||||||||| Sbjct 1050953 GCTTCTTAGAGGAACATTGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 1051012 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT---- 185 |||| ||||||||| || ||| ||||||| |||||||||| | | |||||||| Sbjct 1051013 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATATATAACGAGTTATTA 1051072 Query 186 --------CAT-----------------------------CA-------CCTTGGCCGGA 201 ||| || ||| |||| | Sbjct 1051073 AAAATATGCATTTATTTGTATCTTTGATGCTTATATTTTGCATACTTTTCCTCCGCCGAA 1051132 Query 202 AGGTCTGGGTAATCTTGTTAAAC-TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 ||| | ||||||||| | || | | ||||| |||||||||| |||||||||||| Sbjct 1051133 AGGCGTAGGTAATCTTTATCAATATATATCGTGATGGGGATAGATTATTGCAATTATTAA 1051192 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||| ||||||||||||||||||||| | ||||||| | | ||| ||||||||||| Sbjct 1051193 TCTTGAACGAGGAATGCCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGC 1051252 Query 321 CCTTTGTA 328 |||||||| Sbjct 1051253 CCTTTGTA 1051260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192640256