Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 102 6e-17 >seq6 Length=3179732 Score = 102 bits (112), Expect = 6e-17 Identities = 206/306 (67%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 ||||||||| ||| | || |||||| | | ||||||||| | | ||||| Sbjct 1470643 TTCACCCCAAGTTTCACTTAAACCTGGACATTCATTTGGACACATTAATGTCCAATTTTT 1470702 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 || | || || | |||||| |||||||| | ||| | || || || | ||| || Sbjct 1470703 ATTTTCTTTAACTCTCTTCATAAAAAGATCAGGAACCCATACAGCATAAAATAAATCTCG 1470762 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 ||||| | || || | || || || || | || || | || ||||| || || | Sbjct 1470763 TGCTCTTAATTCTTCTTTTCCATGGTTCTTTCTTAAATCTAAAAATTCAAATATATCTGA 1470822 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 |||||||||||| | || | || ||||| ||| ||||||| || |||||||| || || Sbjct 1470823 ATGCCATGGTTCAATATAAACAGCAAACGATCCCTTACGTTTTCCTCCACCTTGATCTAC 1470882 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 || | || || || || || | ||||| ||||| | || |||||| | ||||| Sbjct 1470883 ATATCTTGCAGTATCATTAAAAACTCTTAACATAGGTACTAAACCATTAGATATTCCATT 1470942 Query 66562 GGTGCC 66567 ||| || Sbjct 1470943 GGTACC 1470948 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 65480 GGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCG 65539 ||||||||||||||| |||| ||||||||||| | |||||||||||||||||| || || Sbjct 1469876 GGTTCAAAGGATTCATTGTTTCCTAGAATTTGTGAAGTAGATGCAGTTGGCATAGGTGCT 1469935 Query 65540 ACCAACAATGAGTTTC 65555 | || |||||||||| Sbjct 1469936 AATAATAATGAGTTTC 1469951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564235155280