Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 6e-11 >seq9 Length=1049758 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||||| |||||||| ||| | || || || | ||| || |||| || || | Sbjct 573565 CATAAATAAATCAGGTACCCAAATAGCATAAAATAAATCACGAGCTCTCAATTCTTCTTT 573624 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||||||||| | || || | || ||||| || || | ||||||||||| | || Sbjct 573625 ACCGTGATTTTTTCTTAAATCTAAAAATTCAAAAATATCTGAGTGCCATGGTTCAATATA 573684 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 | || || || ||| | | ||| ||||||||||| || || || | || || || Sbjct 573685 TACAGCAAAAGAACCCTTTCTTTTTCCGCCACCTTGATCTACATATCTTGCTGTATCATT 573744 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || || | ||||| || || | || || ||| | ||||| || || Sbjct 573745 AAAAACTCTTAACATTGGAACTAAACCATTTGATATACCATTAGTTCC 573792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567680206240