Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2 134 3e-29 seq5 109 1e-21 >seq2 Length=814089 Score = 134 bits (148), Expect = 3e-29 Identities = 202/292 (69%), Gaps = 34/292 (12%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 137127 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 137068 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT- 188 |||| ||||||||| || ||| ||||||| |||||||||| | |||||||| | Sbjct 137067 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTATAACGAGTTATTA 137008 Query 189 -----------CACCTTGG--------------------CCGGAAGGTCTGGGTAATCTT 217 || |||| | | || || | ||||||||| Sbjct 137007 AAATTACGATTCAGCTTGCTGTTTCGCATTTTTCCTCCACTGAAAAGTGTAGGTAATCTT 136948 Query 218 GTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATG 276 | | | | ||||| |||||||||| |||||||||||| |||| ||||||||||| Sbjct 136947 TATCAGTACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATG 136888 Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| | ||||||| | | ||| ||||||||||||||||||| Sbjct 136887 CCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 136836 >seq5 Length=1427117 Score = 109 bits (120), Expect = 1e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| |||||||||| |||||||||||| |||| ||||||||||||||||||||| | Sbjct 150467 TCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAAGCAC 150408 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||| || | | ||| ||||||||||||||||||| Sbjct 150407 GATTCATTAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 150368 Score = 98.7 bits (108), Expect = 2e-18 Identities = 92/116 (79%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 150686 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 150627 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||| ||||||||| || ||| ||||||| |||||||||| | ||||||||| Sbjct 150626 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTACAACGAGTT 150571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196457472