Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq559 104 1e-20 seq10 84.2 1e-14 seq3 84.2 1e-14 seq2 84.2 1e-14 seq5 78.8 5e-13 >seq559 Length=1610 Score = 104 bits (114), Expect = 1e-20 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 1307 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1248 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 1247 CATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1191 >seq10 Length=1419739 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 12893 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 12943 >seq3 Length=1011127 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 807069 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 807019 >seq2 Length=755035 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 147114 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 147164 >seq5 Length=1370936 Score = 78.8 bits (86), Expect = 5e-13 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 107574 CCTAGTCGGTATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 107624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278392827720