Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2595 122 2e-25 seq2748 98.7 3e-18 seq2714 98.7 3e-18 seq2711 98.7 3e-18 seq2708 98.7 3e-18 >seq2595 Length=2363 Score = 122 bits (134), Expect = 2e-25 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||||||||||||| | || |||||| | || | | ||||||| ||| Sbjct 853 CTGCATCTTCACAGATAATTTTATTTCATTAAGATTTTTTTTAAGACAGCATTTAAGTCG 912 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| | ||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 913 TTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGT 972 Query 131 TATTGTTACGGCCGCCGTTTAC 152 ||| | ||| |||||||||||| Sbjct 973 TATAGATACAGCCGCCGTTTAC 994 >seq2748 Length=5990 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 987 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 1046 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 1047 CGTTTACGATACAGCCGCCGTTTA 1070 >seq2714 Length=875 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 688 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 747 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 748 CGTTTACGATACAGCCGCCGTTTA 771 >seq2711 Length=862 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 91 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 150 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 151 CGTTTACGATACAGCCGCCGTTTA 174 >seq2708 Length=16531 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 3761 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 3820 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 3821 CGTTTACGATACAGCCGCCGTTTA 3844 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 9751 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 9810 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 9811 CGTTTACGATACAGCCGCCGTTTA 9834 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 15741 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 15800 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 15801 CGTTTACGATACAGCCGCCGTTTA 15824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260765353216