Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq2595 96.9 4e-18 seq2748 82.4 8e-14 seq2714 82.4 8e-14 seq2711 82.4 8e-14 seq2708 82.4 8e-14 >seq2595 Length=2363 Score = 96.9 bits (106), Expect = 4e-18 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 49 AATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNN 108 |||| |||||||||| |||| | |||||| | || | || |||||| Sbjct 850 AATCTGCATCTTCACAGATAATTTTATTTCATTAAGATTTTTTTTAAGACAGCATTTAAG 909 Query 109 NNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 168 |||| | ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 910 TCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGAC 969 Query 169 CGTTA 173 ||||| Sbjct 970 CGTTA 974 >seq2748 Length=5990 Score = 82.4 bits (90), Expect = 8e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 991 TACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 1050 >seq2714 Length=875 Score = 82.4 bits (90), Expect = 8e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 692 TACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 751 >seq2711 Length=862 Score = 82.4 bits (90), Expect = 8e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 95 TACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 154 >seq2708 Length=16531 Score = 82.4 bits (90), Expect = 8e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 3765 TACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 3824 Score = 82.4 bits (90), Expect = 8e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 9755 TACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 9814 Score = 82.4 bits (90), Expect = 8e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| |||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 15745 TACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 15804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547185432852