Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5 138 2e-30 seq10 134 3e-29 seq3 134 3e-29 seq2 134 3e-29 >seq5 Length=1370936 Score = 138 bits (152), Expect = 2e-30 Identities = 203/292 (70%), Gaps = 34/292 (12%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 107005 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 106946 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT- 188 |||| ||||||||| || ||| ||||||| |||||||||| | ||||||||| | Sbjct 106945 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTACAACGAGTTATTA 106886 Query 189 -----------CACCTTGG--------------------CCGGAAGGTCTGGGTAATCTT 217 || |||| | | || || | ||||||||| Sbjct 106885 AAATTACGATTCAGCTTGCTGTTACGTATTTTTCCTCCACTGAAAAGTGTAGGTAATCTT 106826 Query 218 GTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATG 276 | | | | ||||| |||||||||| |||||||||||| |||| ||||||||||| Sbjct 106825 TATCAGTACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATG 106766 Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| || |||| || | | ||| ||||||||||||||||||| Sbjct 106765 CCTAGTAAGCACGATTCATTAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 106714 >seq10 Length=1419739 Score = 134 bits (148), Expect = 3e-29 Identities = 202/292 (69%), Gaps = 34/292 (12%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 12389 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 12330 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT- 188 |||| ||||||||| || ||| ||||||| |||||||||| | |||||||| | Sbjct 12329 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTATAACGAGTTATTA 12270 Query 189 -----------CACCTTGG--------------------CCGGAAGGTCTGGGTAATCTT 217 || |||| | | || || | ||||||||| Sbjct 12269 AAATTACGATTCAGCTTGCTGTTTCGTATTTTTCCTCCACTGAAAAGTGTAGGTAATCTT 12210 Query 218 GTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATG 276 | | | | ||||| |||||||||| |||||||||||| |||| ||||||||||| Sbjct 12209 TATCAGTACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATG 12150 Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| | ||||||| | | ||| ||||||||||||||||||| Sbjct 12149 CCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 12098 >seq3 Length=1011127 Score = 134 bits (148), Expect = 3e-29 Identities = 202/292 (69%), Gaps = 34/292 (12%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 807573 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 807632 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT- 188 |||| ||||||||| || ||| ||||||| |||||||||| | |||||||| | Sbjct 807633 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTATAACGAGTTATTA 807692 Query 189 -----------CACCTTGG--------------------CCGGAAGGTCTGGGTAATCTT 217 || |||| | | || || | ||||||||| Sbjct 807693 AAATTACGATTCAGCTTGCTGTTTCGTATTTTTCCTCCACTGAAAAGTGTAGGTAATCTT 807752 Query 218 GTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATG 276 | | | | ||||| |||||||||| |||||||||||| |||| ||||||||||| Sbjct 807753 TATCAGTACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATG 807812 Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| | ||||||| | | ||| ||||||||||||||||||| Sbjct 807813 CCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 807864 >seq2 Length=755035 Score = 134 bits (148), Expect = 3e-29 Identities = 202/292 (69%), Gaps = 34/292 (12%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 146610 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 146551 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT- 188 |||| ||||||||| || ||| ||||||| |||||||||| | |||||||| | Sbjct 146550 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTATAACGAGTTGTTA 146491 Query 189 -----------CACCTTGG--------------------CCGGAAGGTCTGGGTAATCTT 217 || |||| | | || || | ||||||||| Sbjct 146490 AAATTACGATTCAGCTTGCTGTTTCGTATTTTTCCTCCACTGAAAAGTGTAGGTAATCTT 146431 Query 218 GTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATG 276 | | | | ||||| |||||||||| |||||||||||| |||| ||||||||||| Sbjct 146430 TATCAGTACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATG 146371 Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| | ||||||| | | ||| ||||||||||||||||||| Sbjct 146370 CCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 146319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947173970944