Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2595 118 4e-24 seq2748 91.5 5e-16 seq2714 91.5 5e-16 seq2711 91.5 5e-16 seq2708 91.5 5e-16 >seq2595 Length=2363 Score = 118 bits (130), Expect = 4e-24 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 369 TTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428 || |||||||| ||||||||| | ||| |||||||||||||||||||||||||||| Sbjct 893 TTAAGACAGCATTTAAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAA 952 Query 429 TTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 |||||||||||| ||| ||||||| ||| |||||||||||| Sbjct 953 TTTCGCTACCTTTGGACCGTTATAGATACAGCCGCCGTTTACT 995 >seq2748 Length=5990 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 981 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 1040 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 1041 TAGGACCGTTTACGATACAGCCGCCGTTTA 1070 >seq2714 Length=875 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 682 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 741 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 742 TAGGACCGTTTACGATACAGCCGCCGTTTA 771 >seq2711 Length=862 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 85 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 144 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 145 TAGGACCGTTTACGATACAGCCGCCGTTTA 174 >seq2708 Length=16531 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 3755 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 3814 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 3815 TAGGACCGTTTACGATACAGCCGCCGTTTA 3844 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 9745 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 9804 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 9805 TAGGACCGTTTACGATACAGCCGCCGTTTA 9834 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 15735 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 15794 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 15795 TAGGACCGTTTACGATACAGCCGCCGTTTA 15824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702353218048