Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002385.1_202014-08-27] 154 sequences; 22,755,895 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq154 77.0 8e-12 >seq154 Length=29401 Score = 77.0 bits (84), Expect = 8e-12 Identities = 98/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 206 GTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAAC 265 ||||||||| |||| | | ||| |||| ||||||||| | || | |||| Sbjct 28272 GTGAAATGCAATGATACAAAAAAGAATACCAAAGGCGAAGGCATAATACTATATAATAAC 28331 Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||| | ||||||| || |||||| ||||||||||||||| |||||| || Sbjct 28332 TGACACTTATAAACGAAAGCTAAGGTAGCAAATAGGATTAGATACCCTAGTAGTCTTAGC 28391 Query 326 CGTAAACGATGAATA 340 |||||| ||||||| Sbjct 28392 TGTAAACTATGAATA 28406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203198147072