Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11 114 2e-23 seq10 95.1 2e-17 >seq11 Length=1045168 Score = 114 bits (126), Expect = 2e-23 Identities = 102/124 (82%), Gaps = 4/124 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | || ||||| || |||||||||| ||| | Sbjct 974053 GTACAAAGGGCAGGGACGTAGTCAGCACAATCT-GATGAATCATGCTTACTAGGCATT-C 973996 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG--ATGAAATTTCAAAGAT 118 |||||| |||| || ||||||||| |||||||||||||||| ||| | | |||||| Sbjct 973995 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATATGTATTGATAAAGAT 973936 Query 119 TACC 122 |||| Sbjct 973935 TACC 973932 Score = 95.1 bits (104), Expect = 2e-17 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||| | | ||||||||||| ||||||| ||| || | |||||||| ||||||||| Sbjct 973851 ACTCGTTTTACATATCAGTGTAGCACGCGTGCAGCCTAGTATATCTAAGGACATCACAGA 973792 Query 207 CCTGTTATTGCCTCAAACTTCCGTG 231 |||||| |||||| |||||||| || Sbjct 973791 CCTGTTGTTGCCTTAAACTTCCTTG 973767 >seq10 Length=1045897 Score = 95.1 bits (104), Expect = 2e-17 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||| | | ||||||||||| ||||||| ||| || | |||||||| ||||||||| Sbjct 824752 ACTCGTTTTACATATCAGTGTAGCACGCGTGCAGCCTAGTATATCTAAGGACATCACAGA 824693 Query 207 CCTGTTATTGCCTCAAACTTCCGTG 231 |||||| |||||| |||||||| || Sbjct 824692 CCTGTTGTTGCCTTAAACTTCCTTG 824668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998564855