Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq197 122 2e-25 seq196 102 2e-19 >seq197 Length=29736 Score = 122 bits (134), Expect = 2e-25 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||||||||||||| | || |||||| | || | | ||||||| ||| Sbjct 4271 CTGCATCTTCACAGATAATTTTATTTCATTAAGATTTTTTTTAAGACAGCATTTAAGTCG 4212 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| | ||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 4211 TTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGT 4152 Query 131 TATTGTTACGGCCGCCGTTTAC 152 ||| | ||| |||||||||||| Sbjct 4151 TATAGATACAGCCGCCGTTTAC 4130 >seq196 Length=6512 Score = 102 bits (112), Expect = 2e-19 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 4605 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 4664 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| || ||| ||||||||||| Sbjct 4665 CGTTTATGATACAGCCGCCGTTTA 4688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797516224