Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq11 152 8e-35 seq10 152 8e-35 >seq11 Length=1045168 Score = 152 bits (168), Expect = 8e-35 Identities = 106/119 (89%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA-CTCCAC 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct 973578 GCTAATTAGCAGGTTAAGATCTCGTTCGTTATCGGAATTAACCAGACAAATCATATTCAC 973519 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| |||||||||||| ||||| ||| ||||||||||||||||| |||||||| Sbjct 973518 GAACTAAAAACGGCCATGCATCACCATCCAAGAAATCAAGAAAGAGCTATTAATCTGTC 973460 Score = 96.9 bits (106), Expect = 6e-18 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| ||| || | |||||||| ||||||||||||||| |||||| Sbjct 973837 TCAGTGTAGCACGCGTGCAGCCTAGTATATCTAAGGACATCACAGACCTGTTGTTGCCTT 973778 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 |||||||| | | | || | || || |||||||||||| Sbjct 973777 AAACTTCCTTGTGTTAGACACACATCGTTCCTCTAAGAAGC 973737 >seq10 Length=1045897 Score = 152 bits (168), Expect = 8e-35 Identities = 106/119 (89%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA-CTCCAC 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct 824482 GCTAATTAGCAGGTTAAGATCTCGTTCGTTATCGGAATTAACCAGACAAATCATATTCAC 824423 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| |||||||||||| ||||| ||| ||||||||||||||||| |||||||| Sbjct 824422 GAACTAAAAACGGCCATGCATCACCATCCAAGAAATCAAGAAAGAGCTATTAATCTGTC 824364 Score = 96.9 bits (106), Expect = 6e-18 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||| ||| || | |||||||| ||||||||||||||| |||||| Sbjct 824738 TCAGTGTAGCACGCGTGCAGCCTAGTATATCTAAGGACATCACAGACCTGTTGTTGCCTT 824679 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 |||||||| | | | || | || || |||||||||||| Sbjct 824678 AAACTTCCTTGTGTTAGACACACATCGTTCCTCTAAGAAGC 824638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798479357