Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq197 114 2e-23 >seq197 Length=29736 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| | ||||||| ||| Sbjct 4828 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTATCGCTTTAATAGGC 4769 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| | |||||| || |||| | ||| |||||| || ||||||||||| Sbjct 4768 GAACAGACTTACCCTTAAAACATACTACTGCCTTAGGATGCGATAAGCCGACATCG 4713 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| | ||||||| ||| Sbjct 29604 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTATCGCTTTAATAGGC 29663 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| | |||||| || |||| | ||| |||||| || ||||||||||| Sbjct 29664 GAACAGACTTACCCTTAAAACATACTACTGCCTTAGGATGCGATAAGCCGACATCG 29719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780798509892