Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11 111 3e-22 seq10 93.3 8e-17 >seq11 Length=1045168 Score = 111 bits (122), Expect = 3e-22 Identities = 98/121 (81%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 209 GGTAATCTTGTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267 ||||||||| | || | | ||||| |||||||||| |||||||||||| |||| || Sbjct 973932 GGTAATCTTTATCAATACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAA 973991 Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 ||||||||||||||||||| | ||||||| | | ||| |||||||||||||||||| Sbjct 973992 CGAGGAATGCCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGT 974051 Query 328 A 328 | Sbjct 974052 A 974052 Score = 93.3 bits (102), Expect = 8e-17 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 973737 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 973796 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| |||||||| | || ||| ||||||| |||||||||| Sbjct 973797 GATGTCCTTAGATATACTAGGCTGCACGCGTGCTACACTGA 973837 >seq10 Length=1045897 Score = 93.3 bits (102), Expect = 8e-17 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 824638 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 824697 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| |||||||| | || ||| ||||||| |||||||||| Sbjct 824698 GATGTCCTTAGATATACTAGGCTGCACGCGTGCTACACTGA 824738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198134016