Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20[genbank_20GCA_5F900002395.1_202014-08-27] 197 sequences; 22,031,682 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq197 118 4e-24 seq196 91.5 5e-16 >seq197 Length=29736 Score = 118 bits (130), Expect = 4e-24 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 369 TTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428 || |||||||| ||||||||| | ||| |||||||||||||||||||||||||||| Sbjct 4231 TTAAGACAGCATTTAAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAA 4172 Query 429 TTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 |||||||||||| ||| ||||||| ||| |||||||||||| Sbjct 4171 TTTCGCTACCTTTGGACCGTTATAGATACAGCCGCCGTTTACT 4129 >seq196 Length=6512 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 4599 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 4658 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 4659 TAGGACCGTTTATGATACAGCCGCCGTTTA 4688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702396646272