Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq3897 82.4 1e-13 >seq3897 Length=1146 Score = 82.4 bits (90), Expect = 1e-13 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 204 GTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCC 263 ||| ||||||| |||||| || | |||||| |||| |||||| ||||| | || Sbjct 1034 GTACCGGAATATTAACCGGTTTT-CCATCGACTACGCCTTTCGGCCTCGCCTTAGGTGCC 1092 Query 264 GACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGA 315 |||| |||||| |||||||||| || ||||||||||| | |||||||||| Sbjct 1093 GACTAACCCTGCGCCGATTAGCGTTGCGCAGGAAACCTT-GGCTTTCGGCGA 1143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959945404800