Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq3814 154 1e-35 >seq3814 Length=1146 Score = 154 bits (170), Expect = 1e-35 Identities = 110/124 (89%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 972 CCCTACGGCTACCT-GTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAAGCGCCC 914 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||| Sbjct 913 TCCTTGCGGTTAGACTACCTACTTCTGGTGCAACCCACTCCCATGG-GTGACGGGCGGTG 855 Query 135 TGTA 138 |||| Sbjct 854 TGTA 851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345581574120