Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3814 340 5e-91 >seq3814 Length=1146 Score = 340 bits (376), Expect = 5e-91 Identities = 290/352 (82%), Gaps = 8/352 (2%) Strand=Plus/Plus Query 64 AGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTG 123 ||||||||||||||||||||||||||||||| ||| |||||||| |||| | | |||| Sbjct 2 AGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGCGGTTTGATAAGTCTGATGTG 61 Query 124 AAATCCCCGGGCTTAACCTGGGAATTGCATTTG-TGACTGCACGACTAGAGTGTGTCAGA 182 ||| ||| |||||||||||||||| |||||| | | ||| | || ||||||| ||| Sbjct 62 AAAGCCCTGGGCTTAACCTGGGAACTGCATTGGATACCTGTCAGGCTCGAGTGTGGTAGA 121 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||| |||||||| | |||||||||||||||||||||| || | |||||||||| ||| Sbjct 122 GGGTAGTGGAATTTCCGGTGTAGCAGTGAAATGCGTAGAGATCGGAAGGAACACCAGTGG 181 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACG-CTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||||| || ||||| |||||||||| || | | ||||||||||||||||||||| Sbjct 182 CGAAGGCGGCTACCTGGACCAACACTGACGCCTGAGGTGCGAAAGCGTGGGGAGCAAACA 241 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG--GGGATTT 359 |||||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||| Sbjct 242 GGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCAACTAGCCGTTGGAGGGGTTT 301 Query 360 A--CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||| || || || |||||||||| |||||||||||||||||| ||| Sbjct 302 AACCTT--TTAGTGGCGCAGCTAACGCGATAAGTTGACCGCCTGGGGAGTAC 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289526660448