Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3814 192 5e-47 >seq3814 Length=1146 Score = 192 bits (212), Expect = 5e-47 Identities = 139/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| |||||||||||| || |||||||||||| ||||| ||||||| Sbjct 782 TCGAGTTGCAGACTGCAATCCGGACTAAGACCGGCTTTCTGGGATTGGCTCCACCTCGCG 723 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | ||||| ||||||||| |||||||| ||||||| |||||| |||||||||||| Sbjct 722 GCTTGGCTACCCTCTGTACCGGCCATTGTAGCACGTGTGTAGCCCTGGCCATAAGGGCCA 663 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||||||||||||||||||||||||||| |||| Sbjct 662 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTATCAC 622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415977081390