Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq3897 122 6e-26 >seq3897 Length=1146 Score = 122 bits (134), Expect = 6e-26 Identities = 107/132 (81%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 6 TTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTC 65 |||||||||||||||||||||||||| | || | |||||||||||||| ||||| ||||| Sbjct 1 TTTATCCGTTGAGCGATGGCCCTTCC-TACAGAACCACCGGATCACTAGGACCTACTTTC 59 Query 66 GCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTA 125 | | |||||| | | ||| ||||||| |||||| | |||||||| || |||| | Sbjct 60 GTACCTGCTCGACTCGTTCGTCTCGCAGTCAAGCGCGCTTTTGCCCTTACACTCTTTGCG 119 Query 126 CGATTTCCGACC 137 ||||||||||| Sbjct 120 TGATTTCCGACC 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351981232900