Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq3897 147 2e-33 >seq3897 Length=1146 Score = 147 bits (162), Expect = 2e-33 Identities = 127/156 (81%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||| | ||||||||||||||||||| ||||| |||||| ||||| Sbjct 8 GTTGAGCGATGGCCCTTCC-TACAGAACCACCGGATCACTAGGACCTACTTTCGTACCTG 66 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| |||||||||||||| |||| |||| || |||| | ||| || Sbjct 67 CTCGACTCGTTCGTCTCGCAGTCAAGCGCGCTTTTGCCCTTACACTCTTTGCGTGATTTC 126 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| | | ||| |||||||||||||||||||| Sbjct 127 CGACCACGCTGAGCGCACCTTCGTGCTCCTCCGTTA 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473573908044