Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01002172.1 Length=233 Score E Sequences producing significant alignments: (Bits) Value seq2097 107 2e-21 >seq2097 Length=2663 Score = 107 bits (118), Expect = 2e-21 Identities = 106/136 (78%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 90 GAGGACACAGACT-ATGAGCGATATCCCTGCCGACCTGCGTTTTGCCGAAAGTCACGAAT 148 |||||||| |||| |||||| || | || |||| ||| | ||| | | ||||||| Sbjct 946 GAGGACACCGACTCATGAGCAATTTGCCGGCCGGGCTGAAATACGCCAAGACCCACGAAT 1005 Query 149 GGGCCCGTCTGGAAGCTGACGGCACCGTGACCGTGGGTATCTCCGACCATGCCCAGGAAG 208 ||||||| ||||||| || || ||||| | || || || ||||||||||||||||||| Sbjct 1006 GGGCCCGCTTGGAAGCGGATGGAACCGTCAAGGTCGGAATTTCCGACCATGCCCAGGAAG 1065 Query 209 CGTTGGGGGATGTGGT 224 || |||||||| |||| Sbjct 1066 CGCTGGGGGATCTGGT 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 646364388006