Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20yoelii_20yoelii_20[genbank_20GCA_5F000003085.2_202002- 10-03] 5,687 sequences; 23,125,449 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3814 284 3e-74 seq444 77.0 8e-12 >seq3814 Length=1146 Score = 284 bits (314), Expect = 3e-74 Identities = 274/349 (79%), Gaps = 2/349 (1%) Strand=Plus/Plus Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 ||||||| |||||||||||||||||||| | ||||||| ||||| |||||| || ||| Sbjct 2 AGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGCGGTTTGATAAGTCTGATGTG 61 Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAAC-TGCAGGGCTAGAGTGCAGGAGG 180 |||| | |||| |||| || ||||| || || || || |||| ||||| | || Sbjct 62 AAAGCCCTGGGCTTAACCTGGGAACTGCATTGGATACCTGTCAGGCTCGAGTGTGGTAGA 121 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || ||||||||| | ||||||| |||||||||||||| || | |||||||||||||| Sbjct 122 GGGTAGTGGAATTTCCGGTGTAGCAGTGAAATGCGTAGAGATCGGAAGGAACACCAGTGG 181 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACAC-TGAGGCTCGAAAGCGTGGGGAGCAAACA 299 ||||||||||| |||||| |||||| | ||||| ||||||||||||||||||||| Sbjct 182 CGAAGGCGGCTACCTGGACCAACACTGACGCCTGAGGTGCGAAAGCGTGGGGAGCAAACA 241 Query 300 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATA 359 |||||||||||||||||||||||||| |||||||||| ||||| || || | | | Sbjct 242 GGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCAACTAGCCGTTGGAGGGGTTT 301 Query 360 AGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| |||||| ||||| |||||| || ||||||||||| Sbjct 302 AACCTTTTAGTGGCGCAGCTAACGCGATAAGTTGACCGCCTGGGGAGTA 350 >seq444 Length=6911 Score = 77.0 bits (84), Expect = 8e-12 Identities = 98/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 206 GTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAAC 265 ||||||||| |||| | | ||| |||| ||||||||| | || | |||| Sbjct 5136 GTGAAATGCAATGATACAAAAAAGAATACCAAAGGCGAAGGCATAATACTATATAATAAC 5195 Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||| | ||||||| || |||||| ||||||||||||||| |||||| || Sbjct 5196 TGACACTTATAAACGAAAGCTAAGGTAGCAAATAGGATTAGATACCCTAGTAGTCTTAGC 5255 Query 326 CGTAAACGATGAATA 340 |||||| ||||||| Sbjct 5256 TGTAAACTATGAATA 5270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203131574016