Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq14460 111 2e-22 >seq14460 Length=589 Score = 111 bits (122), Expect = 2e-22 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| ||||||||||| ||||| || | || Sbjct 489 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTGGCTGTCAATGCAGTTTTAC 430 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||| | ||||| | ||| || || | || |||| || || ||||| || Sbjct 429 CGCGTTTTGTCAACTTAGCATACACTTGGGGACCTTAGCTGATGATCTGGGTTCTTTCCC 370 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| |||||||||||||||| || | || | | |||||| Sbjct 369 TCTCGGACATGGACCTTAGCACCCATGCCCTCACT-GCTCAACAACATTTTATAGCATTC 311 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| ||||| ||| Sbjct 310 GGAGTTTGTCAGGAATTG 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537513666984