Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq6305 77.0 6e-12 seq5532 77.0 6e-12 seq2185 77.0 6e-12 >seq6305 Length=1131 Score = 77.0 bits (84), Expect = 6e-12 Identities = 92/124 (74%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 209 GGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTT 268 |||||| ||||| || | |||||| |||| |||||| ||||| | |||||| Sbjct 363 GGAATATTAACCTGTTTT-CCATCGACTACGCCTTTCGGCCTCGCCTTAGGTGCCGACTC 421 Query 269 ACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCAC 328 |||||| | ||||||| | ||||||||||| | |||||||| |||||||| ||| Sbjct 422 ACCCTGCGCTGATTAGCATGGCGCAGGAAACCTTGGGTTTTCGGCGTGGGGGTTTTTCAC 481 Query 329 CCCC 332 |||| Sbjct 482 CCCC 485 >seq5532 Length=1239 Score = 77.0 bits (84), Expect = 6e-12 Identities = 92/123 (75%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 209 GGAATACTAACC-GTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACT 267 |||||| ||||| | ||| |||||| |||| |||||| ||||| | ||| || Sbjct 506 GGAATATTAACCTGGTTC--CCATCGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCT 449 Query 268 TACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCA 327 ||||||| | ||||||| || |||||| |||| | ||||||||||| |||| || || Sbjct 448 TACCCTGCGCTGATTAGCATTGCGCAGGAACCCTTGGACTTTCGGCGAGAGGGTCTCTCA 389 Query 328 CCC 330 ||| Sbjct 388 CCC 386 >seq2185 Length=2392 Score = 77.0 bits (84), Expect = 6e-12 Identities = 97/131 (74%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 203 AGTAACGGAATACTAACC-GTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGAC 261 |||| |||||| ||||| ||||| |||||| ||| || || ||||| | Sbjct 465 AGTACGGGAATATTAACCCGTTTC--CCATCGACTACGCATCTCTGCCTCGCCTTAGGGG 522 Query 262 CCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGT 321 ||||||||||||| | ||||||| | ||||||||||| ||||| ||||| |||||| Sbjct 523 CCGACTTACCCTGCCCTGATTAGCATGGGACAGGAAACCTTGGTCTTCCGGCGTGGGGGT 582 Query 322 TTCCCACCCCC 332 || ||||||| Sbjct 583 TTTTCACCCCC 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959840860800