Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1751 107 2e-21 seq6305 102 8e-20 seq2185 93.3 4e-17 >seq1751 Length=2850 Score = 107 bits (118), Expect = 2e-21 Identities = 134/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61 ||||||||||||||| ||||||| ||||||||| || | ||| |||||| || | Sbjct 1629 TACCTGAAGCTTAGAGGCTTTTCCTGGAAGCATAGCGTTAACAGCTTCGTGTCCTTGGAC 1688 Query 62 ATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACC 121 | |||||| || || | || ||| | |||||||||||||| | | |||||| Sbjct 1689 A---CTCGTC-TCGTATCTCAGCATTAAGAAACCGGATTTACCTAATCTCTCTGCCTACA 1744 Query 122 ACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCAT 181 ||| || |||| ||||||||| || ||||||| ||||||||||| |||||||| Sbjct 1745 TACTTTCACGCGGACTACCAACGCCGCGCCTGCCTAGCTTTCTCCGTCCCCCCATCGCAG 1804 Query 182 TA 183 || Sbjct 1805 TA 1806 >seq6305 Length=1131 Score = 102 bits (112), Expect = 8e-20 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 3 ACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGA 62 |||||||||||||| | ||||||||||||||||||||||| |||||| | ||||| | Sbjct 172 ACCTGAAGCTTAGAGGTTTTTCTTGGAAGCATGGCATCAATCACTTCACCCCCTAAAGG- 230 Query 63 TAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 |||| ||||| || | | || |||||||||| || | || | ||||| Sbjct 231 -GGCTCGACATCACGTCTCAGGATTGTGTTCCCGGATTTTCCAAGGAACACTCCCTACAC 289 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 ||| ||| | |||||||| | || | |||||||||||||||| | ||||||| Sbjct 290 GCTTGAACCGGAACAACCAATCTCCGGCCGACCTAGCCTTCTCCGTCACCTCATCGCA 347 >seq2185 Length=2392 Score = 93.3 bits (102), Expect = 4e-17 Identities = 124/168 (74%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 12 TTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATAACTCGTC 71 ||||| | ||||| ||||||| ||||||||| |||| || | | | || ||||| Sbjct 289 TTAGAGGGTTTTCCTGGAAGCCGGGCATCAACTGCTTCTACACCGTAGTG-TA--TCGTC 345 Query 72 ATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCTACCACCTTAAA 129 || || | | | || |||| ||||||||||| || |||| | ||||| ||| | Sbjct 346 -TCGTGTCTCAGGCATACAGAATTCCGGATTTACCAAAAATTCAACCCTACGCACTTTCA 404 Query 130 CTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATC 177 | ||||| |||||||||| || ||||||||||||||||| | ||||| Sbjct 405 CATGGACTACCAACGCCATGCCAGCCTAGCCTTCTCCGTCACCCCATC 452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518316750306