Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2067 95.1 1e-17 seq1552 86.0 6e-15 seq8912 82.4 7e-14 seq3514 82.4 7e-14 seq1724 82.4 7e-14 seq6053 80.6 3e-13 >seq2067 Length=1706 Score = 95.1 bits (104), Expect = 1e-17 Identities = 131/179 (73%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 9 GTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGG 68 |||||||||| ||| | ||||||| |||||||||| || |||||| |||| | |||| Sbjct 857 GTGGATGCCTTGGCGATAAGAGGCGATGAAGGACGTGGTACGCTGCGTTAAGCCATGGGG 916 Query 69 ATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG--ATATATTGGAG 126 | || | | | ||||||| | ||||||||||||||| |||||| | || Sbjct 917 AGCTGCGAACAAGCTTTGATCCATGGATATCCGAATGGGGAAACCCGGCCCGCAAGGGTC 976 Query 127 AT--ATATCATAACGC-TAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || |||| || | |||| | |||||||| ||||||||||||||||||||||| Sbjct 977 ATCATTATCTGAATACATAGGGTAATGAGGCGAACCTGGGGAACTGAAACATCTAAGTA 1035 >seq1552 Length=3150 Score = 86.0 bits (94), Expect = 6e-15 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 |||| |||||||||| | ||||||| ||||||||||||| |||||| |||| | | | Sbjct 2216 GGTGAATGCCTAGGCAGTAAGAGGCGATGAAGGACGTGATACTCTGCGATAAGCCATGAG 2157 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||||||||| Sbjct 2156 GAGCTGAGAATAAGCTTTGATCCATGGATTTCCGAATGGGGCAACCC 2110 >seq8912 Length=891 Score = 82.4 bits (90), Expect = 7e-14 Identities = 85/110 (77%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||||||| ||| || ||||||| ||||||||| ||| |||||||||||| | Sbjct 330 ACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTACTAACCTGCGAAAAGCTGTG 271 Query 66 GGGATTGGCACATACGAATT-GATCCGTAGATATCCGAATGGGGCAACCC 114 || | | | | | || || ||| |||||||||||||||| ||||| Sbjct 270 GGAAGCCGGTAAGAGGCGTTAGACCCGCAGATATCCGAATGGGGAAACCC 221 >seq3514 Length=1690 Score = 82.4 bits (90), Expect = 7e-14 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | ||||||| ||| |||||| | |||||| |||||||||| Sbjct 1320 GGTGGATGCCTTGGCACAAAGAGGCGATGAAAGACGTGGCACTCTGCGATAAGCTACGGG 1261 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 || || | || ||||||||||||| || ||||||||||||||| Sbjct 1260 GAGGTGAGAGCAAC-CTTTGATCCGTAGATTTCTGAATGGGGCAACCCG 1213 >seq1724 Length=1402 Score = 82.4 bits (90), Expect = 7e-14 Identities = 85/110 (77%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||||||| ||| || ||||||| ||||||||| ||| |||||||||||| | Sbjct 330 ACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTACTAACCTGCGAAAAGCTGTG 271 Query 66 GGGATTGGCACATACGAATT-GATCCGTAGATATCCGAATGGGGCAACCC 114 || | | | | | || || ||| |||||||||||||||| ||||| Sbjct 270 GGAAGCCGGTAAGAGGCGTTAGACCCGCAGATATCCGAATGGGGAAACCC 221 >seq6053 Length=1168 Score = 80.6 bits (88), Expect = 3e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | ||||||| ||||||||||||| |||||| ||| | ||| Sbjct 518 GGTGGATGCCTTGGCAGTAAGAGGCGATGAAGGACGTGATACTCTGCGATAAGTCATGGG 459 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | || ||||||||||||||||| Sbjct 458 GAGCTGAGAATAAGCTTTGATCCATGAATTTCCGAATGGGGCAACCC 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476723430837