Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3582 304 3e-80 seq204 230 6e-58 seq10039 165 2e-38 seq379 129 2e-27 >seq3582 Length=1677 Score = 304 bits (336), Expect = 3e-80 Identities = 265/327 (81%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 || || | |||||||||| |||||||||||||||||||||||| |||| | |||||| Sbjct 339 AAGAAACCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGT 280 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAG-ACAGGTGTGAAATCCC 130 ||||||||||||||||||||||| || |||||| | | ||| | ||| |||||||||| Sbjct 279 TCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATCAGAAAGTATAGG-GTGAAATCCC 221 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| |||| |||| ||| || ||| | | || |||| | ||||| | ||| Sbjct 220 AGGGCTCAACCCTGGAACTGCCTTGTAAACTCCTGGTCTTGAGTTCGAGAGAGGTGAGTG 161 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 |||||||| |||||| ||||||| ||||||||| ||||||||||||| |||||||||| Sbjct 160 GAATTCCAAGTGTAGAGGTGAAATTCGTAGATATTTGGAGGAACACCAGTGGCGAAGGCG 101 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 || | |||| | ||||||||| | | |||||| ||||||||||||||||||||||| Sbjct 100 GCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGTGTGGGGAGCAAACAGGATTAGAT 41 Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||| || |||||||| Sbjct 40 ACCCTGGTAGTCCACACCGTAAACGAT 14 >seq204 Length=12833 Score = 230 bits (254), Expect = 6e-58 Identities = 292/394 (74%), Gaps = 6/394 (2%) Strand=Plus/Minus Query 20 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATT 79 |||||||| |||||||||||||||||||||||| || | ||||||| |||||| Sbjct 12514 CCGGCTAATCTCGTGCCAGCAGCCGCGGTAATACGAGAGGCCCGAGCGTTAGGCGGAATC 12455 Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139 ||||||| ||||| ||||| |||||| | ||||| ||||||||||| |||| || Sbjct 12454 ACTGGGCTTAAAGGGTGCGTAGGCGGATCAGTAAGCATTTTGTGAAATCCCTCGGCTCAA 12395 Query 140 CCTGGGAATTGCATTTGTGA-CTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCA 198 || ||||||||| |||| |||| | || ||| | |||||| |||| Sbjct 12394 CCGAGGAATTGCAGA-GTGAACTGCTGGTCTTGAGGTAGGCAGAGGTCATCGGAACGTAC 12336 Query 199 CGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTG 258 ||| ||| ||||||||||||||||| ||||| || | || | || ||| ||| Sbjct 12335 GGTGGAGCGGTGAAATGCGTAGATATCGTACGGAACGCCGAAGGGGTAGCCAGGTGACTG 12276 Query 259 GGA-TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGG 317 || | || |||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct 12275 GGCCTTAC-CTGACGCTGAGGCACGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGG 12217 Query 318 TAGTCCACGCCCTAAACGATATCAACTAG-TTGTTGGGGAT-TTACTTCCTTGGTAACGT 375 ||||||||||| |||||||| | ||||| ||| ||| ||| | ||| || ||| Sbjct 12216 TAGTCCACGCCGTAAACGATGTGCACTAGTTTGGTGGAGATCTGACTCTCTGCCAGACGC 12157 Query 376 AGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || | | |||| |||||||||||| ||| Sbjct 12156 CGAGAAATCATTAAGTGCACCGCCTGGGGAGTAC 12123 >seq10039 Length=819 Score = 165 bits (182), Expect = 2e-38 Identities = 127/151 (84%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 || |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 183 AAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGT 124 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131 ||||||||||||||||||||||| || |||||| | |||| ||| ||||||||||| Sbjct 123 TCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATTATTAAGTCAGATGTGAAATCCCA 64 Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACTG 162 |||| ||||| |||| |||||||| |||| Sbjct 63 AGGCTCAACCTTGGAACTGCATTTGAAACTG 33 >seq379 Length=8950 Score = 129 bits (142), Expect = 2e-27 Identities = 86/96 (90%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 97 AGAAGAAGCTCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTT 38 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG 105 ||||||||||||||||||||||| ||| |||||| Sbjct 37 GTTCGGAATTACTGGGCGTAAAGCGCGCGTAGGCGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289386223008