Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq8185 138 1e-30 seq219 134 1e-29 seq5356 93.3 4e-17 seq2185 82.4 8e-14 seq1552 77.0 3e-12 seq1751 75.2 1e-11 seq6305 73.4 4e-11 >seq8185 Length=950 Score = 138 bits (152), Expect = 1e-30 Identities = 140/176 (80%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||||| | || ||| |||||||||| |||||| || ||||| Sbjct 561 CGTAAACCGACACAGGTAGTCGAGGAGAGTATCCTAAGGCGCTCGAGTGATTCGTGGTTA 502 Query 82 AGGAACTAGGCAAACT-GACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||||||||| | ||| | |||||||||||| ||| ||| || | || ||| | Sbjct 501 AGGAACTAGGCAAAATCGACGC-GTAACTTCGGGA-GAAGCGTCGCT-CTGAGTAATCAG 445 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | | ||||| ||| ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 444 A-GCCGCAGTGAAAAGGCCCAGGCGACTGTTTAGCAAAAACACAGGACTCTGCAAA 390 >seq219 Length=12377 Score = 134 bits (148), Expect = 1e-29 Identities = 136/175 (78%), Gaps = 8/175 (5%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGG---TTA 81 |||| |||||| |||| | | |||||| |||||||||| ||| || |||| | | Sbjct 5658 AAACCGACACAGGTAGATGAGGTGAATAACCTAAGGCGCTCGAG---ATAACGGAAGTGA 5714 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||| |||||||| |||||| |||| |||| ||||| ||| |||||||| |||| Sbjct 5715 AGGAATTAGGCAAATTGACCCCGTAAGTTCGCGATAAGGGGGCCCTACCCCTCG--GGGA 5772 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 |||||||||||| ||| | ||| |||||||| ||||||||||| |||||| || Sbjct 5773 GGGCGCAGAGAAAAGGCTCTGGCGACTGTTTATCAAAAACACAGCACTGTGCTAA 5827 >seq5356 Length=1268 Score = 93.3 bits (102), Expect = 4e-17 Identities = 131/180 (73%), Gaps = 7/180 (4%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||| |||||||||||| ||| | | | ||| Sbjct 650 CAAACCGACACAGGTGGTCTGGTAGAGTATACCAAGGCGCTTGAGAGAACTATGTTGAAG 591 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG-GTCC-CTACCCAG--AAATGG 139 ||||| |||||| || || |||| |||| || || || | || | || || || | | Sbjct 590 GAACTCGGCAAAATGCTCCCGTAAGTTCGCGAGAAGGGAGACCTCCACTTAGGCAACTAG 531 Query 140 GAGGG---CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||| ||| ||| ||| ||| |||||||| |||||||||||||| ||| || Sbjct 530 GTGGGGGTGGCACAGACCAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCGAA 471 >seq2185 Length=2392 Score = 82.4 bits (90), Expect = 8e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||||||||| ||| | ||| ||| Sbjct 263 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGCTTGAGAGAACCCGGGTGAAG 204 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||| |||||| | | |||||||||||| || Sbjct 203 GAACTCGGCAAAATAGTACCGTAACTTCGGGAGAA 169 >seq1552 Length=3150 Score = 77.0 bits (84), Expect = 3e-12 Identities = 126/179 (70%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 598 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGTTGAAGG 539 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC--TACCCAG--AAAT--- 137 |||| |||||| | | | |||| |||| || || | | ||| | || || || | Sbjct 538 AACTCGGCAAAATACCTCCGTAAGTTCGCGAGAAGGAGGCCCGGTTCCTAGGCAACTAGG 479 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| | | ||| ||| |||||||| |||||||||||||| ||| || Sbjct 478 GGCTGGGGGCACAAACCAGGGGGTGGCGACTGTTTATTAAAAACACAGGGCTCTGCGAA 420 >seq1751 Length=2850 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTT-AAG 83 |||| |||||| || ||| ||| || |||| |||||||||||| ||| | ||| | ||| Sbjct 1612 AAACCGACACAGGTGGTCAGGTAGAGCATACCAAGGCGCTTGAGAGAA-CTCGGCTGAAG 1554 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| | | |||||||||||| || Sbjct 1553 GAACTAGGCAAAATAGTACCGTAACTTCGGGAGAA 1519 >seq6305 Length=1131 Score = 73.4 bits (80), Expect = 4e-11 Identities = 78/103 (76%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | ||| || || |||||||||||||| ||| ||| ||| Sbjct 154 CAAACCGACACAGGTGGGTGGGGAGAGAATCCTAAGGCGCTTGAGAGAACTCGGGTGAAG 95 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC 126 ||||| |||||| | || | |||||||||||| || | || || Sbjct 94 GAACTCGGCAAAATAACACCGTAACTTCGGGAGAAGGTGTGCC 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531114694758