Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1751 165 8e-39 seq2185 154 1e-35 seq8185 114 1e-23 seq5532 111 2e-22 seq1552 111 2e-22 seq5356 107 2e-21 seq219 98.7 9e-19 seq5976 89.7 5e-16 >seq1751 Length=2850 Score = 165 bits (182), Expect = 8e-39 Identities = 120/139 (86%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 20 GAGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 79 || ||||||||||||||||| | |||| || ||||| ||||| ||||||||| Sbjct 1501 GAAGGACTTGCTCCGTAAGCAATAGAGAGTCGCAGTGACCAGCTGGCTGCAACTGTTTAT 1442 Query 80 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGT 139 ||||||||||||||||||||||| || ||| |||||||||||||||||| |||||||||| Sbjct 1441 TAAAAACACAGCACTCTGCAAACTCGCAAGAGGACGTATAGGGTGTGACACCTGCCCGGT 1382 Query 140 GCCGGAAGGTTAATTGATG 158 ||||||||||||||||||| Sbjct 1381 GCCGGAAGGTTAATTGATG 1363 >seq2185 Length=2392 Score = 154 bits (170), Expect = 1e-35 Identities = 114/133 (86%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 26 CTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAA 85 ||||| |||||| ||| || || || ||||| |||| |||||||||||||||| Sbjct 145 CTTGCGAGGTAAGCAGATGGTGGCCGCAGTGACCAGATGGCTGGGACTGTTTATTAAAAA 86 Query 86 CACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGA 145 ||||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 85 CACAGCACTGTGCTAACACGAAAGTGGACGTATACGGTGTGACACCTGCCCGGTGCCGGA 26 Query 146 AGGTTAATTGATG 158 ||||||||||||| Sbjct 25 AGGTTAATTGATG 13 >seq8185 Length=950 Score = 114 bits (126), Expect = 1e-23 Identities = 81/93 (87%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| |||||||||| ||||||||||| |||||| || ||||| Sbjct 431 AGGCCCAGGCGACTGTTTAGCAAAAACACAGGACTCTGCAAACTCGAAAGATGAAGTATA 372 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| |||| ||||||||||||||||||||||| Sbjct 371 GGGTCTGACACCTGCCCGGTGCCGGAAGGTTAA 339 >seq5532 Length=1239 Score = 111 bits (122), Expect = 2e-22 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||| ||||||||||| |||||| || || ||| ||||| Sbjct 744 ACCAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 803 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| |||||||||||||||||||||||||||| Sbjct 804 ATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 839 >seq1552 Length=3150 Score = 111 bits (122), Expect = 2e-22 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||||||||||||||| |||||| || || ||| ||||| Sbjct 464 ACCAGGGGGTGGCGACTGTTTATTAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 405 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| |||||||||||||||||| ||||||||| Sbjct 404 ATAGGGTCTGACGCCTGCCCGGTGCCTGAAGGTTAA 369 >seq5356 Length=1268 Score = 107 bits (118), Expect = 2e-21 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||| ||||||||||| |||||| || || ||| ||||| Sbjct 515 ACCAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 456 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTG 155 ||||||| ||||||||||||||||| |||||||||| || Sbjct 455 ATAGGGTCTGACGCCTGCCCGGTGCTGGAAGGTTAAATG 417 >seq219 Length=12377 Score = 98.7 bits (108), Expect = 9e-19 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||||||| ||| ||| || ||| ||||||||| |||||| Sbjct 5794 GCGACTGTTTATCAAAAACACAGCACTGTGCTAACTCGCAAGAGGACGTATACAGTGTGA 5853 Query 128 CGCCTGCCCGGTGCCGGAAGGT 149 ||||||||| |||||||| || Sbjct 5854 CGCCTGCCCAATGCCGGAATGT 5875 >seq5976 Length=1176 Score = 89.7 bits (98), Expect = 5e-16 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA-AAGTGGACGTATAGGGTGTG 126 ||||||||||| |||||||| || |||||| || | || |||||||||||| || Sbjct 506 GCGACTGTTTACTAAAAACATAGGGCTCTGCGAAGTGGCTAACACGACGTATAGGGTCTG 447 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||||||||||||||| Sbjct 446 ACGCCTGCCCGGTGCCGGAAGGTTAA 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476723430837