Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq8185 331 2e-88 seq5356 324 3e-86 seq5532 307 2e-81 seq5976 279 1e-72 seq1552 279 1e-72 seq219 271 2e-70 seq1751 259 1e-66 seq13452 161 2e-37 seq5884 86.0 1e-14 seq8981 78.8 2e-12 >seq8185 Length=950 Score = 331 bits (366), Expect = 2e-88 Identities = 287/352 (82%), Gaps = 3/352 (1%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 ||||||| |||||| | | ||||||||||||| | |||||||||||||||| |||| Sbjct 155 CGGCATCATCACCGATACTTCAATTTCACCGAGCTCGTGGTTGAGACAGTGCCCAGATCG 214 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 215 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 274 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||||||||||| ||||||| ||| | ||||| |||| Sbjct 275 TATAGTTACGGCCGCCGTTTACCGGGGCTTCAGTCAATACCTTCGCCGAAGCTAAGTACC 334 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || |||||||||| |||||||||||| ||||| ||||||| || |||| ||| || || Sbjct 335 TCCTTTAACCTTCCGGCACCGGGCAGGTGTCAGACCCTATACTTCATCTTTCGAGTTTGC 394 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC-CTGTCATAGA 303 ||| |||||||||||| ||||||||||| ||||||| ||| ||||||| ||| || Sbjct 395 AGAGTCCTGTGTTTTTGCTAAACAGTCGCCTGGGCCTTTTCACTGCGGCTCTG-ATTACT 453 Query 304 CAG-GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354 ||| || | |||||||| |||||||| | |||||||| ||||||||||| Sbjct 454 CAGAGCGACGCTTCTCCCGAAGTTACGCGTCGATTTTGCCTAGTTCCTTAAC 505 >seq5356 Length=1268 Score = 324 bits (358), Expect = 3e-86 Identities = 296/374 (79%), Gaps = 20/374 (5%) Strand=Plus/Plus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||| | |||||||| | ||||||| | || Sbjct 242 ACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGTCTATGTTGGAGACAGCGGGGAAG 301 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 302 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 361 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||||||||||| | ||| | || |||| || Sbjct 362 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCATTTCGCAGC-----TTGC----ACC 412 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 413 ACTCCATTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTT 472 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------- 294 ||||| ||||||||||| |||||||||||| ||| ||| ||| || Sbjct 473 CGCAGAGCCCTGTGTTTTTAGTAAACAGTCGCCACCCCCTGGTCTGTGCCACCCCCACCT 532 Query 295 ---TGTCATAG-ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 || | || ||| |||||||| | || ||||||| ||||||||||||||||| Sbjct 533 AGTTGCCTAAGTGGAGGTCTCCCTTCTCGCGAACTTACGGGAGCATTTTGCCGAGTTCCT 592 Query 351 TAACAATAGTTCTC 364 | | ||||||||| Sbjct 593 TCAACATAGTTCTC 606 >seq5532 Length=1239 Score = 307 bits (340), Expect = 2e-81 Identities = 293/375 (78%), Gaps = 21/375 (6%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||| |||||||| | ||||||||| || Sbjct 1018 TACTCCGCATCTTCACGGAGAGTTCAATTTCACTGAGTCTATGCTGGAGACAGTGGGGAA 959 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 958 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 899 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| || ||||| || Sbjct 898 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTC-------GGA--GCTCTCAC 848 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct 847 TCCTCCTTTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACT 788 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | ||||| ||||||||||| |||||||||||| ||| ||| ||| | | ||| Sbjct 787 TCGCAGAGCCCTGTGTTTTTAGTAAACAGTCGCCACCCCCTGGTCTGTGCCCCTGGACAT 728 Query 301 -----------AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 | ||||| |||||||| | || ||||||| | ||||||||||||| Sbjct 727 CGGTTGCCCGACGCCAGGC-TCCCTTCTCGCGAACTTACGGGAGTAATTTGCCGAGTTCC 669 Query 350 TTAACAATAGTTCTC 364 || | | ||||||| Sbjct 668 TTCAGCAGAGTTCTC 654 >seq5976 Length=1176 Score = 279 bits (308), Expect = 1e-72 Identities = 286/376 (76%), Gaps = 21/376 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||| | ||||| || | ||||||||| || Sbjct 242 TACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGTCGATGCTGGAGACAGTGGGGAA 301 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 302 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 361 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| ||| | ||||| || Sbjct 362 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTC---------AAAGCTCTCAC 412 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT-GCGAC 239 ||| ||||||||||| |||||||||||||||||| ||||||| |||| || || || Sbjct 413 CTCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTGTTAGCCAC 472 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG--- 296 || ||||| ||| ||||||| ||||||||||||| |||| ||| ||| || | Sbjct 473 TTCGCAGAGCCCTATGTTTTTAGTAAACAGTCGCTACCCCCTAGTCTGTGCCCCCCGCCA 532 Query 297 --------TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 ||| || || ||| |||| |||||||| || |||||||||||| Sbjct 533 ATGGTTGCCCATTAACGGGGCTTGCTTATCCCGAAGTTACGCAAGCAATTTGCCGAGTTC 592 Query 349 CTTAACAATAGTTCTC 364 ||| | || |||||| Sbjct 593 CTTCAGCATCGTTCTC 608 >seq1552 Length=3150 Score = 279 bits (308), Expect = 1e-72 Identities = 285/372 (77%), Gaps = 20/372 (5%) Strand=Plus/Plus Query 4 CCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATC 63 || ||||||| || || | | ||||||| | ||||| || | ||||||| | || || Sbjct 193 CCTGCATCTTGACAGGCAATTCAATTTCGCTGAGTCGATGTTGGAGACAGCGGGGAAGTC 252 Query 64 GTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 123 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 253 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 312 Query 124 TTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGA 183 ||||||||||||||||||||||| |||||| | |||| || ||||| || Sbjct 313 TTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCA-------GA--GCTCTCACCCC 363 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 ||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||| | Sbjct 364 TCCTTTTAACCTTCAGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTTCG 423 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG-TCATAG 302 |||| ||||||||||| ||||||||||| ||| | | ||| || | | ||| Sbjct 424 CAGAGCCCTGTGTTTTTAATAAACAGTCGCCACCCCCTGGTTTGTGCCCCCAGCCCCTAG 483 Query 303 ----------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || || | ||||||| | || |||||| | ||||||||||||||||| Sbjct 484 TTGCCTAGGAACCGGGCCTCCTTCTCGCGAACTTACGGAGGTATTTTGCCGAGTTCCTTC 543 Query 353 ACAATAGTTCTC 364 | || |||||| Sbjct 544 AACATCGTTCTC 555 >seq219 Length=12377 Score = 271 bits (300), Expect = 2e-70 Identities = 272/352 (77%), Gaps = 2/352 (1%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||| ||||||||||||| || |||||||||| | | ||| Sbjct 6062 CGGCATCTTCACCGCCACTACTATTTCACCGAGTCGGAAGTGGAGACAGTGCTCCAGTCG 6003 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 6002 TTACGCCATTCATGCGCGTCGGAACTTACCCGACAAGGAACTTCGCTACCTTAGGACCGT 5943 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 ||||||||||||||| || || || ||||| ||| |||||| ||||| Sbjct 5942 CATAGTTACGGCCGCCATTGACCGGTGCTTAGGTTACGAGCTTCGCCGAAGCTAACCCGC 5883 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || | || |||| ||| |||||||||||| ||||| || |||||||| ||||| Sbjct 5882 TTCCGTGACATTCCGGCATTGGGCAGGCGTCACACTGTATACGTCCTCTTGCGAGTTAGC 5823 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC--ATAG 302 | | ||||||||||| ||||||||||| | |||| ||||||||| ||| | | | Sbjct 5822 ACAGTGCTGTGTTTTTGATAAACAGTCGCCAGAGCCTTTTCTCTGCGCCCTCCCCGAGGG 5763 Query 303 ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354 ||| |||||| || | || ||||||||||| |||||| | |||||| || Sbjct 5762 GTAGGGCCCCCTTATCGCGAACTTACGGGGTCAATTTGCCTAATTCCTTCAC 5711 >seq1751 Length=2850 Score = 259 bits (286), Expect = 1e-66 Identities = 221/271 (82%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCCAAAT 62 |||||||||||||| ||| ||||||||| |||||| | ||||||| || || || Sbjct 1185 CGGCATCTTCACCGCAATTTCAATTTCACTGAGTCTCGGCTGGAGACAGCCTGGCC--AT 1242 Query 63 CGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 122 | |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1243 CATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 1302 Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAG 182 |||||||||||||||||||||||| ||||||| | | |||||| |||| ||||| Sbjct 1303 GTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCTTGCGCTAACCC 1362 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||||||||| |||||||||||| |||| ||||||| || |||||||| || Sbjct 1363 CATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCCTATACGTCCTCTTGCGAGTTT 1422 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 ||||| |||||||||| |||||||| || Sbjct 1423 GCAGAGTGCTGTGTTTTTAATAAACAGTTGC 1453 >seq13452 Length=639 Score = 161 bits (178), Expect = 2e-37 Identities = 152/193 (79%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 25 CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTC 84 ||| |||||| || ||| | ||||||||| ||||| |||| || ||| ||| |||| Sbjct 205 CAAATTCACCAAGCATATACTGGAGACAGTGGAGAAATCATTACACCATTCATGCAGGTC 146 Query 85 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTT 144 |||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||| Sbjct 145 GGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTCAGAGTTACAGCCGCCGTTT 86 Query 145 ACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACC 204 ||||| |||||| | || || ||| | || || | |||| |||||||||| Sbjct 85 ACTGGAGCTTAATT-------TTTGA-TGCCACAGCATCTCTACGTAACTTTCCAGCACC 34 Query 205 GGGCAGGCGTCAG 217 ||||||| ||||| Sbjct 33 GGGCAGGTGTCAG 21 >seq5884 Length=1188 Score = 86.0 bits (94), Expect = 1e-14 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || || ||| || ||||||||||| | |||||||||| |||||||||| Sbjct 633 AAGTCGTTACACCGCTCATGCTGGACGGAACTTACCTGTCAAGGAATTTTGCTACCTTAG 692 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 |||||||| | || |||||||| || Sbjct 693 GACCGTTAACCTGACAGCCGCCGTGTA 719 >seq8981 Length=888 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/88 (80%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 60 AATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 119 |||||||| | ||||| |||||||| | ||| ||||||||| || |||||||| || Sbjct 119 AATCGTTAAGTCTTTCATGCGGGTCACTATTTAGGTGACAAGGAACTTTGCTACCTTCGG 178 Query 120 ACCGTTATAGTTACGGCCGCCGTTTACT 147 || ||||||||||| ||| | |||||| Sbjct 179 ACGGTTATAGTTACAGCCAACATTTACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062223885952