Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq204 392 1e-106 seq8095 358 2e-96 seq8261 322 1e-85 seq16079 259 1e-66 >seq204 Length=12833 Score = 392 bits (434), Expect = 1e-106 Identities = 392/502 (78%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||| | |||||||||||||||||||||| | | ||||||||||||||||| Sbjct 12125 TACGGTCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCTCACACAAGCGGTGGAGCAT 12066 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTG----ACC 116 || | |||||||||||||||||||||||||||||| |||||||| | || | | Sbjct 12065 GTTGCTTAATTCGAAGCAACGCGAAGAACCTTACCTGGGCTTGACATG-TATGGATTAGC 12007 Query 117 CCTCTAGAGATAGAGGTTTC-CCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTC 175 || | || | | || | ||||| ||| | | | ||||||| ||||||| |||| Sbjct 12006 TCT-TGGAAACATGAGTGACGCCCTTTGGGTGGAACATACACAGGTGCTGCATGGCTGTC 11948 Query 176 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTA 235 ||||||||||| |||| ||| |||||||||||| ||||||||||||||||| || Sbjct 11947 GTCAGCTCGTGCTGTGAAGTGTCGGGTTAAGTCCCTTAACGAGCGCAACCCTTATCGCTA 11888 Query 236 GTTGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGG 293 ||||||| | | | | ||| |||||| ||||||||||| ||||||||||||||| Sbjct 11887 GTTGCCAGCGCGTCATGGCGGGGACTCTAGCGAGACTGCCGGTGTCAAACCGGAGGAAGG 11828 Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 |||||| |||||||| || ||||| |||||| | ||| || |||||||||||||| Sbjct 11827 TGGGGATGACGTCAAGTCCTCATGGCCCTTACGCCCAGGGTGGCAAACGTGCTACAATGG 11768 Query 354 ACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 ||||||| | || | | || ||| | |||||||| || |||| | ||||| Sbjct 11767 CGTGTACAAAGCGATGCAATATCGTGAGATGGAGCAAATCGCAAAAAGCACGCCCCAGTT 11708 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG- 472 ||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||| Sbjct 11707 CGGATTGGAGTCTGCAACTCGACTCCATGAAGCCGGAATCGCTAGTAATCGGAGATCAGC 11648 Query 473 CATGCTACGGTGAATACGTTCC 494 || ||| ||||||||||||||| Sbjct 11647 CACGCTCCGGTGAATACGTTCC 11626 >seq8095 Length=957 Score = 358 bits (396), Expect = 2e-96 Identities = 361/459 (79%), Gaps = 14/459 (3%) Strand=Plus/Plus Query 45 ACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGA 104 |||||||||||||||||||||||||||||| | |||||| |||||||||| || || Sbjct 1 ACAAGCGGTGGAGCATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCTGGGCTCGA 60 Query 105 CATCCTCTG-ACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGAC--AGGT 161 | || || || || | || ||| | |||||| | || || |||| Sbjct 61 ATGGTTATGGACAGATCCTGAAAGGGA--TTTTCTCTTCGGAGCT----GTAACCAAGGT 114 Query 162 GATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGC 221 | ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 115 GCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGC 174 Query 222 AACCCTTAAGCTTAGTTGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGAC 279 ||||| || || |||||||| || ||| | |||| ||||| || ||||||||| | Sbjct 175 AACCCCTATTCTCAGTTGCCAGCACGTAATGGTGGGGACTCTGAGAAGACTGCCGGCGT- 233 Query 280 AAACCG-GAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACA 338 || ||| ||||||||||||||||||||||| |||||||| || ||||| |||||||| Sbjct 234 AAGCCGAGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCTTTATGCCCAGGGCTACA 293 Query 339 CACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATA 398 ||||||||||||||| ||||| ||| ||||| | | || || ||| ||||||| | Sbjct 294 CACGTGCTACAATGGTAGGTACAACGGGTCGCGAAGCAGTGATGTGGAGCCAATCCCAGA 353 Query 399 AAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAG 458 ||| ||||||||||||||| |||||| ||||||||| |||||| |||||||||||| Sbjct 354 AAGCCTATCTCAGTTCGGATTGAAGTCTGAAACTCGACTTCATGAAGGTGGAATCGCTAG 413 Query 459 TAATCGTAGATCAG-CATGCTACGGTGAATACGTTCCCG 496 |||||| ||||| |||| ||||||||||||||||| Sbjct 414 TAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCG 452 >seq8261 Length=943 Score = 322 bits (356), Expect = 1e-85 Identities = 270/330 (82%), Gaps = 1/330 (0%) Strand=Plus/Minus Query 167 ATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC 226 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 943 ATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC 884 Query 227 TTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGG 286 | |||||||||| |||| ||||||||||||| | ||||||||||| || |||| Sbjct 883 TCGCCATTAGTTGCCAGCATTGAGTTGGGCACTCTGATGGAACTGCCGGTGATAAGCCGG 824 Query 287 AGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCT 346 ||||||||||||| |||||||| || ||||| |||||||| ||||||||||||||||| Sbjct 823 AGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGCTGGGCTACACACGTGCT 764 Query 347 ACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTT 406 ||||||| ||| ||| |||| ||||| ||| |||| | |||| | | Sbjct 763 ACAATGGCGGTGACAGTGGGATGCGAGCGTGCGAGCGTGAGCTAATCTCCAAAAGCCG-T 705 Query 407 CTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTA 466 ||||||||||||||| |||||||||||| |||||| ||||||||||||||||| Sbjct 704 CTCAGTTCGGATTGTTCTCTGCAACTCGAGAGCATGAAGTCGGAATCGCTAGTAATCGCG 645 Query 467 GATCAGCATGCTACGGTGAATACGTTCCCG 496 ||||||||| ||||||||||||||||| Sbjct 644 TATCAGCATGACGCGGTGAATACGTTCCCG 615 >seq16079 Length=519 Score = 259 bits (286), Expect = 1e-66 Identities = 195/228 (86%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 269 CTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGAT 328 ||||||||||||| ||||||||||| ||||| |||||||| || ||||| |||||| | Sbjct 1 CTGCCGGTGACAAGCCGGAGGAAGGCGGGGATGACGTCAAGTCCTCATGGCCCTTACGGG 60 Query 329 TTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGC 388 ||||||||||||||||||||||||| | ||| |||||||||| |||||||| ||||| Sbjct 61 TTGGGCTACACACGTGCTACAATGGCGATGACAGAGGGCAGCGAGGCCGCGAGGCCAAGC 120 Query 389 AAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTG 448 |||| | ||||| | |||||||||||||||| |||||||||||| |||||| | Sbjct 121 GAATCTCCAAAAGTCG-TCTCAGTTCGGATTGTTCTCTGCAACTCGAGAGCATGAAGTCG 179 Query 449 GAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 180 GAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCG 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503750681920