Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq8185 197 2e-48 seq1751 156 5e-36 seq5976 149 7e-34 seq5532 149 7e-34 seq1552 131 2e-28 seq5356 127 2e-27 seq219 125 8e-27 seq13452 100 3e-19 seq5884 75.2 1e-11 >seq8185 Length=950 Score = 197 bits (218), Expect = 2e-48 Identities = 132/151 (87%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||| | |||||||||||||||| ||||||||||| ||||||||| | Sbjct 126 CGGGGTCTTTTCGTCCCGTTGCGGGTAATCGGCATCATCACCGATACTTCAATTTCACCG 185 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 186 AGCTCGTGGTTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 245 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 246 GACAAGGAATTTCGCTACCTTAGGACCGTTA 276 >seq1751 Length=2850 Score = 156 bits (172), Expect = 5e-36 Identities = 125/152 (82%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| |||||||||||||| | | ||||||||||| Sbjct 1156 CGGGGTCTTTCCGTCTAGCCGCGGGTATACGGCATCTTCACCGCAATTTCAATTTCACTG 1215 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||||||||||||||||||||||||||||| Sbjct 1216 AG-TCTCGGCTGGAGACAGCCTGGCCATCATTACACCATTCGTGCAGGTCGGAACTTACC 1274 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 1275 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 1306 >seq5976 Length=1176 Score = 149 bits (164), Expect = 7e-34 Identities = 121/151 (80%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| || |||||||||| || | | ||||||| ||| Sbjct 217 CGGGGTCTTTCCGTCTGACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 276 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 277 AGTCGATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 336 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 337 GACAAGGAATTTCGCTACCTTAGGACCGTTA 367 >seq5532 Length=1239 Score = 149 bits (164), Expect = 7e-34 Identities = 121/151 (80%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | | |||||| || |||||||||| || | | ||||||||||| Sbjct 1043 CGGGGTCTTTCCGTCTGACCACGGGTACTCCGCATCTTCACGGAGAGTTCAATTTCACTG 984 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 983 AGTCTATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 924 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 923 GACAAGGAATTTCGCTACCTTAGGACCGTTA 893 >seq1552 Length=3150 Score = 131 bits (144), Expect = 2e-28 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||| | | ||||||| || | | | ||||||| ||| Sbjct 165 CGGGGTCTTTCCGTCTAACCGCGGGAAGCCTGCATCTTGACAGGCAATTCAATTTCGCTG 224 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 225 AGTCGATGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 284 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 285 GACAAGGAATTTCGCTACCTTAGGACCGTTA 315 >seq5356 Length=1268 Score = 127 bits (140), Expect = 2e-27 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||| || | | |||||||||| | | | ||||||| ||| Sbjct 216 CGGGGTCTTTCCGTCTAGCCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 275 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 276 AGTCTATGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 335 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 336 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 395 >seq219 Length=12377 Score = 125 bits (138), Expect = 8e-27 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| ||||||||| |||||||||||||| ||||| ||||||| || Sbjct 6090 GGGGTCTTTCCGTCTTGTCGCGGGTAGGCGGCATCTTCACCGCCACTACTATTTCACCGA 6031 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | || ||||||| ||| |||||| ||| ||||||||||||||| Sbjct 6030 GTCGGAAGTGGAGACAGTGCTCCAGTCGTTACGCCATTCATGCGCGTCGGAACTTACCCG 5971 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||| ||||||||||||||||||| Sbjct 5970 ACAAGGAACTTCGCTACCTTAGGACCGT 5943 >seq13452 Length=639 Score = 100 bits (110), Expect = 3e-19 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| | || |||| || ||||||| ||| ||| ||||| Sbjct 254 CGGGGTCTTCCCGTCTAACTGCAAATAATTCGCGTCTTCACGAATAACTCAAATTCACCA 195 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| | | ||||||| |||||||||| ||||||||||||||||||| Sbjct 194 AGCATATACTGGAGACAGTGGAGAAATCATTACACCATTCATGCAGGTCGGAACTTACCC 135 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||| ||||||| Sbjct 134 GACAAGGAATTTCGCTACCTTTGGACCGT 106 >seq5884 Length=1188 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| || ||| || ||||||||||| | |||||||||| ||||||||||||||||| Sbjct 640 TACACCGCTCATGCTGGACGGAACTTACCTGTCAAGGAATTTTGCTACCTTAGGACCGTT 699 Query 173 A 173 | Sbjct 700 A 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547112125323