Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq12674 275 2e-71 seq11348 248 3e-63 seq1609 152 2e-34 >seq12674 Length=676 Score = 275 bits (304), Expect = 2e-71 Identities = 362/495 (73%), Gaps = 10/495 (2%) Strand=Plus/Minus Query 37 GCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGC 96 |||||| || ||||| || ||||| ||| | || |||| ||| | || ||| || Sbjct 489 GCTTTT-GAAGCGTTGGCAGAGAAGCGGGCT-ACAAAGGTTTTTAAT-TCATCGATTTGT 433 Query 97 GCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCAT 156 || || |||||| || || |||||||||| | || | | || ||| || || | ||| Sbjct 432 GCTTT-TTTCTTAGCATTATCCGACAGCATTCGCGCTCTGGCCTGAGTGGCTGCCAGCAT 374 Query 157 GTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTG 216 ||| || ||||| | ||||| | | ||| || || |||||||| || |||||||| || Sbjct 373 GTATTCATCGTAAGTACCCGGATAAACGCGTAGTTCACCGTAGTCGAGATCAGCCATATG 314 Query 217 GGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGA--- 273 || ||| || |||||||| |||||||||||||||||||||||||| | |||| Sbjct 313 GGAACAGACTGAATTCAGGAAATGACGGTCGTGAGAGATGATGATCAT---GGTGGATTC 257 Query 274 ACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGG 333 ||||||| | ||| | |||||| |||||| ||||| | ||| |||| || ||| || || Sbjct 256 ACGCTGGTTTAGGGTGGTTTCCAACCAGCGAATGGTATCGATATCCAGGTTGTTAGTGGG 197 Query 334 TTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAG 393 |||||| || |||| | |||||||||||||| | ||||| |||| |||| || || Sbjct 196 TTCGTCCAGTAACAAAAAGTCAGGATCGGAAAATAATGCCTGTGCCAATAATATCCGAAG 137 Query 394 CTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAG 453 |||||||||||| | | ||| |||||| | ||| | |||||||| ||||| || | Sbjct 136 CTTCCAGCCCGGTGCAATTTCACTCATCAGGCCGTAATGCTGCTCTGTGGGAATGCCTAC 77 Query 454 ACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTC 513 ||| |||||||| |||||||| || || || ||||| ||| ||||| || || Sbjct 76 ACCAAGCAGCAGTTCACCGGCGGCTGAATCTGCTTCATAGCCACCCAATTCGGCAAATTC 17 Query 514 GGTTTCCAGCTCGGC 528 ||||| | ||||| Sbjct 16 AGTTTCTAAATCGGC 2 >seq11348 Length=745 Score = 248 bits (274), Expect = 3e-63 Identities = 399/565 (71%), Gaps = 10/565 (2%) Strand=Plus/Minus Query 10 TTTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGA 69 |||||| ||||| ||||||| ||| |||||| || || || |||||||| ||||| | Sbjct 557 TTTGGCGCGGGAGGTGGCCTG--TTTTGCTTTT-GACGCATTGGCCGAGAAGCGGCTA-A 502 Query 70 CGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTG 129 |||| || |||| || | || || ||| ||| || || || || ||| |||| | Sbjct 501 CGAACTGTT-GCAGGTCTGCAATTTGTGCCGATTTT-TTCGCATTCTCTGACTGCAGACG 444 Query 130 CTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAG 189 |||||| | ||| |||| | |||||| | || || ||||| ||||| ||| |||| Sbjct 443 CTCGCGTGCCTGAGTCGAAGCAGTCATGAAGTCATCATAGTTACCCGGATACACCCGCAA 384 Query 190 CTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTG 249 || || || || | || || || |||||||| || ||||| || |||||||| || Sbjct 383 TTCACCATAATCAATATCGGCAATATGGGTACATACCGCATTCAGAAAATGACGGTCATG 324 Query 250 AGAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGT 309 ||| || |||| ||| || ||||| | | | || ||||||||| || ||||| Sbjct 323 AGAAATAATGACCATAGTACTTTTACGCTCGTTTAATATCGATTCCAGCCAACGAATGGT 264 Query 310 GTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAG 369 |||||| || | || |||||||| || ||||| |||| | || |||||||| || || Sbjct 263 GTTGATATCAAGGTTATTGGTCGGCTCATCGAGTAACAAAATATCCGGATCGGAGAATAG 204 Query 370 CGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAA 429 |||||| || || ||||| ||||| ||||| || || | || |||||||| || || Sbjct 203 CGCCTGCGCAAGTAATACTCGCAGTTTCCATCCGGGTGCGACCTCGCTCATAGGGCCTTC 144 Query 430 GTGC--TGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCG 487 |||| ||| | | |||||| | | | | ||||| || ||| ||| || Sbjct 143 GTGCAAGGCTTCTTC--AATACCGGCGCTGATTAATAATTCACCAGCTCGGCTTTCAGCC 86 Query 488 GTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCT 547 || |||||||||| || | |||| ||||||||| || || ||||||||| ||| Sbjct 85 GTATAGCCGTCCAGTTCACCAAACTGCAGTTCCAGCTCTGCGACCTTCATGCCGTCCTCT 26 Query 548 TCGCTCATTTCCGGCAGCGAGTAAA 572 ||| ||||||| | |||||| |||| Sbjct 25 TCGGTCATTTCTGCCAGCGAATAAA 1 >seq1609 Length=3050 Score = 152 bits (168), Expect = 2e-34 Identities = 170/219 (78%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 10 TTTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGA 69 ||| ||||| |||||||||| |||| |||||| ||||| || || |||||||| || || Sbjct 2838 TTTAGCACGTGAAGTGGCCT-GCTT-GGCTTTA-GAGGCATTAGCAGAGAAACGACT-GA 2893 Query 70 CGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTG 129 |||||| |||||| || | ||||| ||||| |||||||||||| || || ||||| | Sbjct 2894 CGAAGG-TTTGCAATTCAGCAATCTGGGCCTT-TTTCTTGGCGTTATCAGATAGCAGACG 2951 Query 130 CTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAG 189 ||| | || |||||| || | ||| ||||| ||||||||||| ||| | | ||||| Sbjct 2952 CTCCCTGGCCTGGGTAGCAGCAAACATATACTCATCGTAGTTGCCTGGGTATAACCGCAG 3011 Query 190 CTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCT 228 || |||||||| | || ||||| || ||||| ||||| Sbjct 3012 TTCACCGTAGTCTAAATCGGCCATATGAGTACAGACGCT 3050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881278339892