Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq10039 255 1e-65 seq379 214 4e-53 seq8814 187 5e-45 seq2675 183 6e-44 seq3582 172 1e-40 seq204 109 1e-21 >seq10039 Length=819 Score = 255 bits (282), Expect = 1e-65 Identities = 238/305 (78%), Gaps = 17/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct 252 GGCATGGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 311 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || |||| ||| Sbjct 312 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTATAGAT 371 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| ||| ||| || |||||||| |||||| |||| ||| |||||||| Sbjct 372 CGTAGCCTTGGTAAGCTCTTACCTTACCAACTAGCTAATCTAACGCGGGCCAATCTTTCA 431 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||||||||||| | ||| | ||| ||||||| | ||| Sbjct 432 CCGATAAATCTTT----------------CCCCCTAAGGGCGTATAAGGTATTACCTTTC 475 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 ||||||||| | |||||| ||||||||| ||| | |||| |||||||||||||| || Sbjct 476 GTTTCCAAAAGCTATTCCTTAGTGAAAGGCATGTT-CCCACGCGTTACTCACCCGTCTGC 534 Query 301 CACTA 305 ||||| Sbjct 535 CACTA 539 >seq379 Length=8950 Score = 214 bits (236), Expect = 4e-53 Identities = 163/193 (84%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| |||| |||||||||||| || ||||||||||||||||||||| Sbjct 164 GGCATGGCTGCATCAGGCTTTCGCCCATTGTGCAAGATTCCCCACTGCTGCCTCCCGTAG 223 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 224 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATAGAT 283 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| ||| ||| ||||||||| | |||||| |||| || |||| Sbjct 284 CGTCGCCTTGGTGAGCTTTTACCTCACCAACAAGCTAATCTAACGCGGGCTAATCTAAAG 343 Query 181 GCGATAAATCTTT 193 ||||||||||||| Sbjct 344 GCGATAAATCTTT 356 >seq8814 Length=899 Score = 187 bits (206), Expect = 5e-45 Identities = 157/193 (81%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| || | |||||||| || || ||||||||||||||||||||| Sbjct 68 GGCATGGCTAGATCAGGCTTGCGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAG 127 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| ||| || | ||| ||||||| || |||| ||| Sbjct 128 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTTGCTGATCATCCTCTCAAACCAGCTATAGAT 187 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| ||| |||| | ||||||||| |||||| |||| ||| ||| ||| Sbjct 188 CGTAGACTTGGTAGGCCATTACCCCACCAACTATCTAATCTAACGCGGGCCGATCCTTCT 247 Query 181 GCGATAAATCTTT 193 |||||||||||| Sbjct 248 CCGATAAATCTTT 260 >seq2675 Length=2078 Score = 183 bits (202), Expect = 6e-44 Identities = 149/181 (82%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| || | |||||||| || || ||||||||||||||||||||||||||||||||| Sbjct 2078 TCAGGCTTGCGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 2019 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| ||| || | ||| ||||||| || |||| |||||| | |||||| Sbjct 2018 TGTCTCAGTCCCAGTGTTGCTGATCATCCTCTCAAACCAGCTATAGATCGTAGACTTGGT 1959 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192 ||| |||| | ||||||||| |||||| |||| ||| ||| ||| ||||||||||| Sbjct 1958 AGGCCATTACCCCACCAACTATCTAATCTAACGCGGGCCAATCCTTCTCCGATAAATCTT 1899 Query 193 T 193 | Sbjct 1898 T 1898 >seq3582 Length=1677 Score = 172 bits (190), Expect = 1e-40 Identities = 154/193 (80%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| || | |||||||| || || ||||||||||||||||||||| Sbjct 408 GGCATGGCTAGATCAGGCTTGCGCCCATTGTCTAAGATTCCCCACTGCTGCCTCCCGTAG 467 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| ||| || | || ||||| | || |||| ||| Sbjct 468 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTTGCTGATCGTCCTCTAAAACCAGCTATAGAT 527 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| ||| |||| | ||||||||| |||||| |||| ||| ||| || Sbjct 528 CGTAGACTTGGTAGGCCATTACCCCACCAACTATCTAATCTAACGCGGGCCAATCCTTTC 587 Query 181 GCGATAAATCTTT 193 |||||||||||| Sbjct 588 CCGATAAATCTTT 600 >seq204 Length=12833 Score = 109 bits (120), Expect = 1e-21 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||| | |||| | ||||| | || || | ||||| ||||||||||| Sbjct 12592 GGCATTGCTCCGTCACGCTTTCGCGCATTGCGGAAGATTCGTTACTGCAGCCTCCCGTAG 12651 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||| || | |||||||||| || ||| ||| | || |||||| || |||||| | Sbjct 12652 GAGTCCGGACAGTGTCTCAGTTCCGATGCGGCGGGCCATGCTCTCACACCCGCTACCCGT 12711 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCG 165 | |||||||||| ||| ||| | ||||||| |||| || || || Sbjct 12712 CTTCGGCTTGGTAGGCCTTTACCCCACCAACAACCTGATAGGACG 12756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998234495232