Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq3866 179 1e-42 seq1767 118 3e-24 seq842 77.0 9e-12 seq31 77.0 9e-12 >seq3866 Length=1590 Score = 179 bits (198), Expect = 1e-42 Identities = 294/423 (70%), Gaps = 6/423 (1%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||| |||| || |||||||| ||||| | ||||||||||| ||||| || || || Sbjct 999 ATCAGATACACCTCGCGGGCACCAGCGCCCTGCGCCGATTCACGAATGGCGCGGCGTTCT 1058 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||||||||| || || || || | |||||| || |||||||| | | |||||| Sbjct 1059 ACCTGGGTGGAGCCACAGGGCACACACACCAGCACCCGTGGGCTGGGACGTAAAAAACTG 1118 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || |||| ||| | ||| |||| ||| | ||| || || ||| ||||| || Sbjct 1119 TTGCTGTGAGCCTGGCGGATAAAGTGCTGTAACATTTTTTCAGTGACATAAAAGTCAGCA 1178 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 || |||||||||||||| || || || || || || || || |||||||| | ||| Sbjct 1179 ATTACGCCGTCTTTCATTGGCCGGATAGCTTTGATGTTTCCCGGGGTACGGCCTAACATT 1238 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC-ATGGGT-----CCGA 296 || ||||| | ||| || || | ||||||||| | ||| | || |||| Sbjct 1239 CGTTTGGCGGCATGGCCTACTGCCGCAACACTTTTCGGGCCACCGGCGCGTTCCTGCCGA 1298 Query 297 ATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTG 356 ||||| || || || || || ||||| || || || | || || ||||| || || Sbjct 1299 ATGGCAACCACTGACGGTTCGTTCAGCACTATGCCCTGATCTTTTACATAAATCAGAGTA 1358 Query 357 TTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAAC 416 || || || || | || || || | |||| | ||||| |||||||| ||| || ||| Sbjct 1359 TTCGCTGTACCTAAATCGATAGATAAATCGTTTGAAAAGNGGCCACGCAATTTATTAAAC 1418 Query 417 ATG 419 ||| Sbjct 1419 ATG 1421 >seq1767 Length=2834 Score = 118 bits (130), Expect = 3e-24 Identities = 261/385 (68%), Gaps = 21/385 (5%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||||| | |||| ||||||||||||| | ||| |||| | || || || || ||| Sbjct 2111 ATCAGGTAGACTTTGCGGGCACCGGCGCGGATGGCGCTTTCATGAATCGCGCGGCGTTCC 2052 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCT----GGGCTGCAGGAA 118 || || | | |||| |||||||||| ||| | ||||| | || || || Sbjct 2051 ACAGCCGTCGCCCCCGACGGCACGCAGATCACCACCTGCGGGCTAACAGCGC-GCTGG-- 1995 Query 119 ACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTC 178 | ||| ||||||||| |||||||| || | ||||| ||| ||| |||||| Sbjct 1994 -CGGTT---ATGAACCTTGCGGATGAAGTGCTTGATCATCTCTTCGGCCACGTCGAAGTC 1939 Query 179 GGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAG 238 ||| ||||| ||||| ||| || || ||||| | | |||||| || || ||| || Sbjct 1938 GGCAATCACACCGTCGCGCATGGGGCGGATGGCTTCCACATTGCCCGGCGTCTTGCCCAG 1879 Query 239 CATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCC---- 294 ||| ||||||| || | || ||||| | || | | || || | ||| Sbjct 1878 CATCAGCTTGGCTTCAGCACCCACGGC--CTGAACGTGTTTGCGCCCCTT--CTCCAGCT 1823 Query 295 -GAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGG 353 ||| ||||||||| || ||||| || ||||||| |||||| | || || | |||| Sbjct 1822 TGAA-GGCCACAACAGACGGCTCGTTAAGGACGACGCCGCGCCCTTTGACATACACAAGG 1764 Query 354 GTGTTGGCAGTGCCCAGGTCAATGG 378 |||||||| || || ||||| |||| Sbjct 1763 GTGTTGGCCGTACCGAGGTCGATGG 1739 >seq842 Length=5038 Score = 77.0 bits (84), Expect = 9e-12 Identities = 180/272 (66%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 129 TGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACG 188 || |||||| |||||||| | | ||||| ||| ||| |||||| ||||||||| Sbjct 3188 TGGACCTTGCGGATGAAGTGTTTGATCATCTCTTCGGCGACTTCGAAGTCAGCGATCACG 3129 Query 189 CCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTG 248 || ||| |||||| |||||||| | ||||| ||| || || ||||| |||| Sbjct 3128 CCATCTCGCATCGGGCGAATGGCTTCCATATTCATTGGCGTTTTACCAAGCATCTTCTTG 3069 Query 249 GCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACC 308 || ||| || |||||| ||| | || | || || || ||| |||||| Sbjct 3068 GCATCGTCACCAACGGCATAGACCATCTTGCGGCCGCCTTGATTCATGTAGGCAACAACC 3009 Query 309 GATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCC 368 ||||| |||| || ||| || || | || || | || || || || || || Sbjct 3008 GATGGTTCATCGAGTTTGATGCCCTGCCCCTTTACATAGACCAGCGTATTCGCTGTTCCG 2949 Query 369 AGGTCAATGGAAAGATCGCTGGAAAACATGCC 400 |||||||||| | ||| |||| | ||||| Sbjct 2948 AGGTCAATGGCCATATCTGTGGAGAGAATGCC 2917 >seq31 Length=42615 Score = 77.0 bits (84), Expect = 9e-12 Identities = 186/282 (66%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 |||||||||| |||||||| || | ||| | ||| ||| |||||| ||||| || Sbjct 5072 GTGAACCTTGCGGATGAAGTGCTTGATCATTTCTTCGGCCACGTCGAAGTCAGCGATGAC 5131 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 || || ||| || || || || | || |||| ||||| ||||| ||||| |||| Sbjct 5132 CCCTTCGCGCATTGGGCGGATCGCCTCGATGCTGCCCGGTGTCCGGCCCAGCATCAGCTT 5191 Query 248 GGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAAC 307 ||| || || ||||| | || | ||||| | | | | | || || || Sbjct 5192 GGCATCTTCACCCACGGCGAGCACTTTCTTCTGTCCGTCCTTGATGTGGTACGCGACCAC 5251 Query 308 CGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCC 367 ||| || || |||||||| ||||| | ||||| | ||| || || || || || Sbjct 5252 CGAAGGTTCGGACAGGACGACGCCGCGTCCCTTGACGTAGACAAGCGTATTCGCTGTCCC 5311 Query 368 CAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTT 409 ||||| |||| | || ||||||||||| |||||| Sbjct 5312 AAGGTCGATGGCCATGTCCGACGAAAACATGCCCAACAGTTT 5353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353375613728