Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq16079 150 1e-34 seq8095 145 6e-33 seq8261 141 8e-32 seq204 120 3e-25 >seq16079 Length=519 Score = 150 bits (166), Expect = 1e-34 Identities = 132/162 (81%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATAC-ACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| |||||||| ||| || || ||||| | |||| ||| |||||| Sbjct 166 TCGAGTTGCAGAGAACAATCCGAACT--GAGACGACTTTTGGAGATTCGCTTGGCCTCGC 109 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 || | || ||||||||| |||||||| ||||||| ||||| |||| |||||||| Sbjct 108 GGCCTCGCTGCCCTCTGTCATCGCCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCC 49 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||||| ||||||||||| ||||||| Sbjct 48 ATGAGGACTTGACGTCATCCCCGCCTTCCTCCGGCTTGTCAC 7 >seq8095 Length=957 Score = 145 bits (160), Expect = 6e-33 Identities = 122/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||| |||||| ||||||| ||| |||| |||||||||||| ||||| | || | Sbjct 390 TCGAGTTTCAGACTTCAATCCGAACTGAGATAGGCTTTCTGGGATTGGCTCCACATCACT 331 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || ||| ||| |||| |||||||||| ||||||| |||||| ||||| ||||| Sbjct 330 GCTTCGCGACCCGTTGTACCTACCATTGTAGCACGTGTGTAGCCCTGGGCATAAAGGCCA 271 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| ||||||||||| |||||||||||||| Sbjct 270 TGATGACTTGACGTCGTCCCCACCTTCCTC 241 >seq8261 Length=943 Score = 141 bits (156), Expect = 8e-32 Identities = 130/162 (80%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGG-GATTAGCTCCCCCTCGC 59 |||||||||||| |||||||| ||| || || || ||| ||||||||| | ||||| Sbjct 676 TCGAGTTGCAGAGAACAATCCGAACT--GAGACGGCTTTTGGAGATTAGCTCACGCTCGC 733 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | | || ||| |||| |||||||| ||||||| ||||| |||||||||||| Sbjct 734 ACGCTCGCATCCCACTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGCCCATAAGGGCC 793 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||||||||||||||||| || |||| Sbjct 794 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGCTTATCAC 835 >seq204 Length=12833 Score = 120 bits (132), Expect = 3e-25 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||| ||| | |||| || |||| ||||| ||| || Sbjct 11686 TCGAGTTGCAGACTCCAATCCGAACTGGGGCGTGCTTTTTGCGATTTGCTCCATCTCACG 11745 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || | || |||| |||||||| |||| || |||| | ||||||||| Sbjct 11746 ATATTGCATCGCTTTGTACACGCCATTGTAGCACGTTTGCCACCCTGGGCGTAAGGGCCA 11805 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||||||||||||||||||||||| ||| Sbjct 11806 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGACAC 11846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415933194690