Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1751 192 6e-47 seq11552 147 2e-33 seq15 127 2e-27 seq219 89.7 5e-16 >seq1751 Length=2850 Score = 192 bits (212), Expect = 6e-47 Identities = 136/156 (87%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| Sbjct 795 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTACTTTCGTACCTG 854 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| |||| | ||||| |||||||| |||||||| Sbjct 855 CTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTCTACCATTACACTAACCGTACGATGTC 914 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| |||||||||||||||||||| Sbjct 915 CGACCGTACTTAGCCAACCTTCGTGCTCCTCCGTTA 950 >seq11552 Length=732 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 388 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGTCTTTCGACTCTG 329 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | |||| ||||||||||| || ||||||||||||||||| | | |||| || Sbjct 328 CTCGACCTGTCAGTCTCGCAGTCAGGCTGGCTTATGCCATTGCACTCAACGAGCGATTTC 269 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||||||| || ||||||||| Sbjct 268 CGACCGCTCTGAGCCAACCTTCGCGCGCCTCCGTTA 233 >seq15 Length=59725 Score = 127 bits (140), Expect = 2e-27 Identities = 103/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | | |||||||||||||||||||| |||||| ||| Sbjct 145 GTTGAGCGATGGCCCTTCCATGCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 86 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| ||||||||||| || ||||||||||||||||| | | ||| || Sbjct 85 CTCGACTTGTCAGTCTCGCAGTCAGGCAGGCTTATGCCATTGCACTCAACAGCTGATTTC 26 Query 144 CGACC 148 ||||| Sbjct 25 CGACC 21 >seq219 Length=12377 Score = 89.7 bits (98), Expect = 5e-16 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85 ||||| | | |||||||| | | | | | ||||||||| || |||||| ||||| Sbjct 6452 TGAGCTACGACCCTTCCACACGGGATCGCAGGATCACTAGAGCCCTCTTTCGAGACTGCT 6393 Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145 ||||||||| |||||||||| |||| |||| ||| || |||| | | | || | ||| Sbjct 6392 CGAGCCGTCGCTCTCGCAGTAAAGCTGGCTTGTGCTCTTACACTCAACACGCGGTTTCCA 6333 Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||| | | | | ||||| | |||||||||||| Sbjct 6332 TCCGCGCTGAACCAACCTTTGCGCTCCTCCGTTA 6299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473523944724