Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq11003 84.2 4e-14 >seq11003 Length=762 Score = 84.2 bits (92), Expect = 4e-14 Identities = 175/257 (68%), Gaps = 9/257 (4%) Strand=Plus/Minus Query 12 GCCGCTGGATTTCGCGGTGTTCCCGAC-GTATTCTGCAGGTGGCGACCCTGCTACGTCTG 70 ||||||||||||| | |||||||| |||| ||| | |||||| || | | ||| Sbjct 375 GCCGCTGGATTTCAATGCATTCCCGACAGTAT--TGCTATTAGCGACCATGATCAGGCTG 318 Query 71 GCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTC---CACGGCCAGGACGGCCATGCC 127 | | ||| | ||||| || || | || ||| | ||||| || ||| | Sbjct 317 TCGCTCAACCTGGCCTCAACCCG---ATTAATTCTCGCAGATGGCCACGAAGGCACCCAC 261 Query 128 GCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTC 187 || |||||| |||| ||| | ||||| || | | || || |||||||||| | || Sbjct 260 GCCGCCGGTGAGGTCATCGAAGCCTTTGGCGGCTTTGTCATGGGCGGTAACTTTATTATC 201 Query 188 GGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCC 247 || ||| | ||||| ||||||||| ||||| | ||||| | || | |||||||| | Sbjct 200 GGGATCATTGTGTTTGCGATCCTGGTGATCGTTAACTTCATCGTTATCACCAAGGGTTCT 141 Query 248 GGGCGGATTTCCGAGGT 264 || ||||| |||| || Sbjct 140 GGCCGGATCGCCGAAGT 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809469986589