Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1309 98.7 2e-18 seq9473 96.9 6e-18 seq9634 91.5 2e-16 >seq1309 Length=3544 Score = 98.7 bits (108), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 80 ATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT 139 ||||| | ||||| | |||| |||||||| | |||| |||||||||||||| | | Sbjct 2496 ATCCATCTTGAGCGCTGCAATAAAGGCTTCCT-GTGGGATTTCCACGTTGCCGTATTGGC 2554 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 ||| || || || ||||| ||||| || || ||||||||||| ||| | | || | Sbjct 2555 GCATCTTCTTCTTGCCCGCCTTCTGCTTGTCGAGAAGCTTGCGCTTTCGGGTGGCATCGC 2614 Query 200 CGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGC--GCAAT 257 |||| ||||||||||| |||| ||| | | ||| ||| | | | ||| || || Sbjct 2615 CGCCATAGCATTTGGCGGTGACGTCCTTGCGCATGGCC--GACAGGGTTTCGCGGGCGAT 2672 Query 258 GATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 | | || || |||||||||||||||| || Sbjct 2673 CACGCGGCCACCGATGGCGGCCTGGATCGGGA 2704 >seq9473 Length=854 Score = 96.9 bits (106), Expect = 6e-18 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTT 152 || ||||| || ||||| | | || | || || ||||||| ||||||| |||||||| Sbjct 762 ACAGCAAGAAACGCTTCCT-GAGGCACCTCGACATTGCCCAGCTGCTTCATACGTTTTTT 704 Query 153 ACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTT 212 ||| | || ||||||| |||||| || ||| ||||| |||||||| ||||| || || Sbjct 703 ACCTTCTTTCTGCTTCTGAAGCAGTTTCTTCTTCCGGCTGACGTCACCACCGTAACACTT 644 Query 213 GGCCAGTACGTTCTTTCTGAGAGCCTTGAC 242 ||| |||||||| | | |||||||| Sbjct 643 GGCGGTAACGTTCTTGCGTAATGCCTTGAC 614 >seq9634 Length=841 Score = 91.5 bits (100), Expect = 2e-16 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 73 CCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCC 132 ||||| |||| | |||| | || | ||| || || | | || || ||||| ||||| Sbjct 718 CCTAATCGTCCATCTTGAGGGCGGCGATGAACGCCTCCT-GCGGGATCTCCACCTTGCCG 660 Query 133 ACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTT 192 | | |||||| || || |||||||| ||||| || ||||||||||| || ||| | Sbjct 659 AAGCTGCGCATGCGCTTCTTGCCGGCCTTCTGCTTTTCCAGCAGCTTGCGTTTGCGGGTC 600 Query 193 ACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGC 252 ||||| ||||| ||||||||||| |||| ||| | | || ||| || || Sbjct 599 ACGTCGCCGCCATAGCATTTGGCGGTGACGTCCTTGCGCATGGCGCTGATGGTTTCGCGG 540 Query 253 GCAATGATCTGCCCGCCAATGGCGGCCTGGAT 284 || || | || ||||| ||||| ||||| || Sbjct 539 GCGATCACCTTGCCGCCGATGGCCGCCTGAAT 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838261018432