Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq10039 389 1e-105 seq379 370 3e-100 seq3582 333 8e-89 seq8814 241 4e-61 seq204 197 4e-48 seq2675 170 6e-40 >seq10039 Length=819 Score = 389 bits (430), Expect = 1e-105 Identities = 301/357 (84%), Gaps = 1/357 (0%) Strand=Plus/Minus Query 144 CGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCG 203 |||| | ||| | ||||||| |||||||||||||||||||||| |||||||||||| Sbjct 434 CGGTGAAAGATTGGCCCGCGTTAGATTAGCTAGTTGGTAAGGTAAGAGCTTACCAAGGCT 375 Query 204 ACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAA 263 |||||| |||| | |||||||| || | |||||| ||| |||||||||||| ||| | Sbjct 374 ACGATCTATAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGA 315 Query 264 CTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAAC 323 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 314 CTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCCAT 255 Query 324 GCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGAC 383 ||||||||| |||||||||||| |||| ||||| ||| || | ||| ||||||||| Sbjct 254 GCCGCGTGAATGATGAAGGCCTTAGGGTTGTAAAATTCTTTCGCTAGGGATGATAATGAC 195 Query 384 GGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGG 443 |||| | | |||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 194 AGTACCTAGTAAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGG 135 Query 444 GCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||||||||| | |||||||||| |||||||||| | |||||| || || ||||||| Sbjct 134 GCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGCGCACGTAGGCGGATTATTAAGTC 79 >seq379 Length=8950 Score = 370 bits (410), Expect = 3e-100 Identities = 282/332 (85%), Gaps = 1/332 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 ||||||| |||||||| |||||| |||||| ||| ||||||||||||||| |||| | Sbjct 332 CCCGCGTTAGATTAGCTTGTTGGTGAGGTAAAAGCTCACCAAGGCGACGATCTATAGCTG 273 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 |||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 272 GTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 213 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||| ||||||||||||| ||||||||||||||| | |||||||| | ||| Sbjct 212 AGCAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCCATGCCGCGTGTGTGAT 153 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||||||| |||| ||||| | || || |||||||||||||||||| || | Sbjct 152 GAAGGCCTTAGGGTTGTAAAACACTTTCAGAGGGGAAGATAATGACGGTACCCTCAGAAG 93 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| |||||||||| |||||||||||||||||||||||| |||| ||||||||| | || Sbjct 92 AAGCTCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCG 33 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||||| |||||||||| | ||||||| || Sbjct 32 GAATTACT-GGGCGTAAAGCGCGCGTAGGCGG 2 >seq3582 Length=1677 Score = 333 bits (368), Expect = 8e-89 Identities = 282/346 (82%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 144 CGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCG 203 ||| | ||||| | ||||||| |||||| |||||||| ||||| ||| ||||||| | Sbjct 590 CGGGAAAGGATTGGCCCGCGTTAGATTAGATAGTTGGTGGGGTAATGGCCTACCAAGTCT 531 Query 204 ACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAA 263 |||||| |||| | | ||||| |||| || ||| ||| |||||||||||| ||| | Sbjct 530 ACGATCTATAGCTGGTTTTAGAGGACGATCAGCAACACTGGGACTGAGACACGGCCCAGA 471 Query 264 CTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAAC 323 ||||||||||||||||||||||||||| || ||||||||| ||||||||| ||| | Sbjct 470 CTCCTACGGGAGGCAGCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGATCTAGCCAT 411 Query 324 GCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGAC 383 |||||||||| |||||||||| | ||||||||||||||| || || || ||||||||| Sbjct 410 GCCGCGTGAGTGATGAAGGCCCTAGGGTCGTAAAGCTCTTTCGCCAGAGATGATAATGAC 351 Query 384 GGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGG 443 ||| || | ||| |||||||||||| |||||||||||||||||||||||| ||||| Sbjct 350 AGTATCTGGTAAAGAAACCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGG 291 Query 444 GCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 | ||||||| | |||||||||| |||||||||| | |||||| || Sbjct 290 GTTAGCGTTGTTCGGAATTACT-GGGCGTAAAGCGCACGTAGGCGG 246 >seq8814 Length=899 Score = 241 bits (266), Expect = 4e-61 Identities = 196/238 (82%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 ||||| | ||||||| |||||| |||||||| ||||| ||| ||||||| | |||||| Sbjct 244 AGGATCGGCCCGCGTTAGATTAGATAGTTGGTGGGGTAATGGCCTACCAAGTCTACGATC 185 Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||| | ||||||| ||||| || ||| ||| |||||||||||| ||| ||||||| Sbjct 184 TATAGCTGGTTTGAGAGGATGATCAGCAACACTGGGACTGAGACACGGCCCAGACTCCTA 125 Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329 ||||||||||||||||||||| || ||||||||| ||||||||| ||| | |||||| Sbjct 124 CGGGAGGCAGCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGATCTAGCCATGCCGCG 65 Query 330 TGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTA 387 |||| |||||||||||| ||||||||||||||| || | |||||||||||| ||| Sbjct 64 TGAGTGATGAAGGCCTTAGGGTCGTAAAGCTCTTTCGCCTGTGAAGATAATGACTGTA 7 >seq204 Length=12833 Score = 197 bits (218), Expect = 4e-48 Identities = 264/360 (73%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 134 AAAGCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCT 193 |||||||||||| ||| | | |||| || || | |||||| ||||| ||| Sbjct 12784 AAAGCTCCGGCGCCTTGGGAGCGGCGATCGTCCTATCAGGTTGTTGGTGGGGTAAAGGCC 12725 Query 194 TACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGAC 253 ||||||| ||| || ||||| | |||||| || | ||| ||| ||||||||||| Sbjct 12724 TACCAAGCCGAAGACGGGTAGCGGGTGTGAGAGCATGGCCCGCCGCATCGGAACTGAGAC 12665 Query 254 ACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTG 313 || |||| ||||||||||||||| ||||| |||| || | ||||| || ||||| || Sbjct 12664 ACTGTCCGGACTCCTACGGGAGGCTGCAGTAACGAATCTTCCGCAATGCGCGAAAGCGTG 12605 Query 314 ATGCAGCAACGCCGCGTGAGCGATGAAG-GCCTTCGGGTCGTAAAGCTCTGTCCTCA--- 369 | | ||||| |||||||| | ||||||| | | || ||||| | ||||| | Sbjct 12604 ACGGAGCAATGCCGCGTGTGGGATGAAGCGGTTACGCCGTGTAAACCACTGTCAGGACTT 12545 Query 370 AGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG 429 ||||||| | |||| | | | | |||||| |||||||| |||||||||||||||| Sbjct 12544 AGGAAGA-ACTGACCG-AGTCCA-AAGGAAGGGCCGGCTAATCTCGTGCCAGCAGCCGCG 12488 Query 430 GTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||||| || | ||||||| |||||| ||| |||| ||||||||||||||| || Sbjct 12487 GTAATACGAGAGGCCCGAGCGTTAGGCGGAATCACT-GGGCTTAAAGGGTGCGTAGGCGG 12429 >seq2675 Length=2078 Score = 170 bits (188), Expect = 6e-40 Identities = 228/315 (72%), Gaps = 19/315 (6%) Strand=Plus/Plus Query 1 CGAGCGATTCTCTTCGGAGAAGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCC 60 |||||| ||| |||||| || ||||||||||||||| ||||||||||||| ||| | ||| Sbjct 1782 CGAGCGCTTCACTTCGGTGAGGAGCGGCGGACGGGTTAGTAACGCGTGGG-AACATACCC 1840 Query 61 TGTACACACGGATAACATACCGAAA-GGTATGCTAATACGAGATAATATACTTTTATCGC 119 | | | | ||| | |||| ||| | |||||| ||||| ||| Sbjct 1841 TTCTCTAAGGAATAGCCACTGGAAACGGTGAG-TAATACCT-----TATACGCCCTTCGG 1894 Query 120 ATGGTAGAAGTATCAAAGCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTG 179 | ||| |||| || ||||| | ||||||| |||||| |||||| Sbjct 1895 GGGAAAGATTTATCGGAGA-----------AGGATTGGCCCGCGTTAGATTAGATAGTTG 1943 Query 180 GTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCAC 239 || ||||| ||| ||||||| | |||||| |||| | ||||||| ||||| || || Sbjct 1944 GTGGGGTAATGGCCTACCAAGTCTACGATCTATAGCTGGTTTGAGAGGATGATCAGCAAC 2003 Query 240 ATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAA 299 | ||| |||||||||||| ||| |||||||||||||||||||||||||||| || |||| Sbjct 2004 ACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTAGACAA 2063 Query 300 TGGGCAAAAGCCTGA 314 ||||| |||||||| Sbjct 2064 TGGGCGCAAGCCTGA 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497351742848